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S1_scaffold_2013_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_2013_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..843)
DNA (843bp) protein (281aa)
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:KFC74315.1}; EC=3.4.21.92 {ECO:0000313|EMBL:KFC74315.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ATP-dependent Clp protease, ATP-binding subunit clpA n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UEI0_METS4
ATP-dependent Clp protease ATP-binding protein ClpA
S1_scaffold_2013_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(890..1333)
DNA (444bp) protein (148aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UEH9_METS4
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ATP-dependent Clp protease adaptor protein ClpS
S1_scaffold_2013_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1535..2407
DNA (873bp) protein (291aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Xanthobacteraceae RepID=UPI00035FD9F5 rbh
2-dehydro-3-deoxyphosphooctonate aldolase rbh
S1_scaffold_2013_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2400..3623
DNA (1224bp) protein (408aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LUV2_METRJ
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:KFC69046.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
major facilitator transporter
S1_scaffold_2013_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3608..4063)
DNA (456bp) protein (152aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00818}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LEC6_9RHIZ
7-cyano-7-deazaguanine reductase
S1_scaffold_2013_curated_6
unknown

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4346..4669
DNA (324bp) protein (108aa)

This feature has no annotations

S1_scaffold_2013_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4872..6155
DNA (1284bp) protein (428aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
enolase (EC:4.2.1.11) rbh
enolase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F04C14 rbh
S1_scaffold_2013_curated_8
unknown

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comp(6180..6806)
DNA (627bp) protein (209aa)

This feature has no annotations

S1_scaffold_2013_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6978..7967
DNA (990bp) protein (330aa)
UPI0003CE531A related cluster n=1 Tax=unknown RepID=UPI0003CE531A
Putative permease {ECO:0000313|EMBL:KFC69050.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DMT(drug/metabolite transporter) superfamily permease
S1_scaffold_2013_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7881..8384)
DNA (504bp) protein (168aa)
Two-component system, OmpR family, phosphate regulon response regulator PhoB n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HDP1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFC69051.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
Displaying 10 items

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