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S1_scaffold_1614_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_1614_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..529
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D4F9_BRAJP
S-adenosylmethionine uptake transporter {ECO:0000313|EMBL:KFC63697.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
multidrug DMT transporter permease
S1_scaffold_1614_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(542..1210)
DNA (669bp) protein (223aa)
Transcriptional regulator, TetR family n=1 Tax=Rhodovulum sp. PH10 RepID=J6LAA0_9RHOB
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KFC63698.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
TetR family transcriptional regulator
S1_scaffold_1614_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1359..2561
DNA (1203bp) protein (401aa)
Membrane fusion component of tripartite multidrug resistance system n=1 Tax=Rhodovulum sp. PH10 RepID=J5PFF0_9RHOB rbh
Membrane fusion component of tripartite multidrug resistance system {ECO:0000313|EMBL:KFC63699.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
secretion protein HlyD rbh
S1_scaffold_1614_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2764..4353
DNA (1590bp) protein (530aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VF16_9RHIZ rbh
DHA2 family, drug resistance MFS transporter {ECO:0000313|EMBL:KFC63700.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
EmrB/QacA subfamily drug resistance transporter rbh
S1_scaffold_1614_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4597..5130
DNA (534bp) protein (178aa)
Ferric uptake regulator family protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LM75_9RHIZ
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:KFC63701.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ferric uptake regulator family protein
S1_scaffold_1614_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5127..5414
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003671F18
Putative bacterioferritin-associated {ECO:0000313|EMBL:KFC63702.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative bacterioferritin-associated
S1_scaffold_1614_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5532..6026
DNA (495bp) protein (165aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Bacterioferritin n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H999_9BRAD
bfr; bacterioferritin
S1_scaffold_1614_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6137..6841)
DNA (705bp) protein (235aa)
Putative cold-shock protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AH86_AZOBR
Cold-shock DNA-binding protein family protein {ECO:0000313|EMBL:KFC63707.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cold-shock protein
S1_scaffold_1614_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7170..7784
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000311B007
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:KFC63686.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GCN5 family acetyltransferase
S1_scaffold_1614_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7928..8650)
DNA (723bp) protein (241aa)
membrane protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000346AD55
Protease inhibitor Inh {ECO:0000313|EMBL:KFC63687.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
outer membrane lipoprotein omp19
S1_scaffold_1614_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8861..10813)
DNA (1953bp) protein (651aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Acetyl-coenzyme A synthetase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMT9_9RHIZ rbh
acetyl-CoA synthetase rbh
S1_scaffold_1614_curated_12
unknown

Not on your lists

comp(11396..11698)
DNA (303bp) protein (101aa)

This feature has no annotations

S1_scaffold_1614_curated_13
unknown

Not on your lists

11884..12039
DNA (156bp) protein (52aa)

This feature has no annotations

S1_scaffold_1614_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12045..12452)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IEB4_XANP2
Uncharacterized protein {ECO:0000313|EMBL:KFC73131.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S1_scaffold_1614_curated_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12452..12778)
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC73132.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S1_scaffold_1614_curated_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12790..13785)
DNA (996bp) protein (332aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glycerol-3-phosphate dehydrogenase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036E7F9D rbh
gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] rbh
S1_scaffold_1614_curated_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13782..14837)
DNA (1056bp) protein (352aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57) rbh
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMT4_9RHIZ rbh
S1_scaffold_1614_curated_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15107..16948
DNA (1842bp) protein (614aa)
Uroporphyrinogen III synthase HEM4 n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LLD0_9RHIZ
Uroporphyrinogen III synthase HEM4 {ECO:0000313|EMBL:KFC73136.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
uroporphyrinogen III synthase HEM4
S1_scaffold_1614_curated_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16967..17365
DNA (399bp) protein (133aa)
HemY domain protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LVI6_METRJ
HemY-like protein {ECO:0000313|EMBL:KFC73137.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HemY domain-containing protein
Displaying 19 items

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