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S1_scaffold_1544_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_1544_curated_1
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(109..366)
DNA (258bp) protein (86aa)
dihydroorotate dehydrogenase 2 (EC:1.3.3.1)
Dihydroorotate dehydrogenase (quinone) {ECO:0000255|HAMAP-Rule:MF_00225}; EC=1.3.5.2 {ECO:0000255|HAMAP-Rule:MF_00225};; DHOdehase {ECO:0000255|HAMAP-Rule:MF_00225}; Short=DHOD {ECO:0000255|HAMAP-Rule:MF_00225};; Short=DHODase {ECO:0000255|HAMAP-Rule:MF_00225};; Dihydroorotate oxidase {ECO:0000255|HAMAP-Rule:MF_00225}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=PYRD_NOVAD
S1_scaffold_1544_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(449..1648)
DNA (1200bp) protein (400aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000313|EMBL:KFC71691.1}; EC=2.9.1.1 {ECO:0000313|EMBL:KFC71691.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
seryl-tRNA(Ser) selenium transferase protein (EC:2.9.1.1)
Selenocysteine synthase (Seryl-tRNASer selenium transferase) n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2V6_9RHIZ rbh
S1_scaffold_1544_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1712..2200)
DNA (489bp) protein (163aa)
Putative translation initiation inhibitor, yjgF family protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N7A6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC71693.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
translation initiation inhibitor protein
S1_scaffold_1544_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2208..3020)
DNA (813bp) protein (271aa)
Glutamine transporter subunit ATP-binding component of ABC superfamily n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKQ8_9RHIZ rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFC71694.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glutamine ABC transporter ATP-binding protein rbh
S1_scaffold_1544_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3033..3668)
DNA (636bp) protein (212aa)
UPI0003CEC15E related cluster n=1 Tax=unknown RepID=UPI0003CEC15E
Uncharacterized protein {ECO:0000313|EMBL:KFC71695.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
S1_scaffold_1544_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3673..4341)
DNA (669bp) protein (223aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7XZD6_MESOW
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:KFC71696.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
polar amino acid ABC transporter permease
S1_scaffold_1544_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4507..5379)
DNA (873bp) protein (291aa)
UPI0003D01886 related cluster n=1 Tax=unknown RepID=UPI0003D01886 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFC71697.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
family 3 extracellular solute-binding protein rbh
S1_scaffold_1544_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5781..7307
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036DF002 rbh
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:KFC70949.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
twin-arginine translocation pathway signal rbh
S1_scaffold_1544_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7375..8697)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E6739F rbh
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:KFC70948.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
D-amino acid oxidase
S1_scaffold_1544_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8755..9630)
DNA (876bp) protein (292aa)
Transcriptional regulator n=1 Tax=Pseudomonas viridiflava UASWS0038 RepID=K6AN36_PSEVI
GntR family transcriptional regulator {ECO:0000313|EMBL:KFC70947.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GntR family transcriptional regulator
S1_scaffold_1544_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9717..10379
DNA (663bp) protein (221aa)
Glutamine--fructose-6-phosphate aminotransferase {ECO:0000313|EMBL:KFC70946.1}; EC=2.6.1.16 {ECO:0000313|EMBL:KFC70946.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SIS domain protein n=1 Tax=Pseudomonas fluorescens Q2-87 RepID=J2MKI8_PSEFL
sugar isomerase
Displaying 11 items

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