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S1_scaffold_787_curated

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_787_curated_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1091)
DNA (1089bp) protein (363aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0Q0_9BRAD rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EAQ34165.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
RND family efflux transporter MFP subunit rbh
S1_scaffold_787_curated_2
unknown

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comp(1438..1770)
DNA (333bp) protein (111aa)

This feature has no annotations

S1_scaffold_787_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1784..3523)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D9N1_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KFC75630.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S1_scaffold_787_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3520..4644)
DNA (1125bp) protein (375aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cheB; response regulator receiver modulated CheB methylesterase (EC:3.1.1.61) rbh
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EU14_BRASB rbh
S1_scaffold_787_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4641..5516)
DNA (876bp) protein (292aa)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
CheR-type MCP methyltransferase (EC:2.1.1.80) rbh
chemotaxis protein CheR n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034D9759 rbh
S1_scaffold_787_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5531..6010)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D9N5_BRAJP
CheW protein {ECO:0000313|EMBL:KFC75633.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S1_scaffold_787_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6095..8281)
DNA (2187bp) protein (729aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07HJ1_RHOP5 rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:KFC75634.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
methyl-accepting chemotaxis sensory transducer rbh
S1_scaffold_787_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8335..8820)
DNA (486bp) protein (162aa)
CheW protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VKM6_RHOPX
CheW protein {ECO:0000313|EMBL:KFC75635.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
CheW protein
S1_scaffold_787_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8817..10853)
DNA (2037bp) protein (679aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
CheA signal transduction histidine kinases n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07HI9_RHOP5 rbh
CheA signal transduction histidine kinase rbh
S1_scaffold_787_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10850..11215)
DNA (366bp) protein (122aa)
Response regulator receiver protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M851_METRJ
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein {ECO:0000313|EMBL:KFC75637.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
response regulator receiver protein
S1_scaffold_787_curated_11
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11683..15183)
DNA (3501bp) protein (1167aa)
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R3G0_9RHIZ rbh
diguanylate cyclase/phosphodiesterase rbh
Tax=RBG_16_Alphaproteobacteria_64_48_curated
S1_scaffold_787_curated_12
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15790..16500
DNA (711bp) protein (237aa)
Crp/FNR family transcriptional regulator n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HC01_9RHIZ
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KKB84442.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
S1_scaffold_787_curated_13
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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17037..17252
DNA (216bp) protein (72aa)
Transposase (Class II) n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVK4_9PROT
Transposase (Class II) {ECO:0000313|EMBL:EDP63601.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Transposase, IS4
S1_scaffold_787_curated_14
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17313..18335)
DNA (1023bp) protein (341aa)
Thiamine biosynthesis lipoprotein ApbE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D5T2_9RHIZ rbh
Thiamine biosynthesis protein ApbE {ECO:0000313|EMBL:KFL28360.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
apbE; thiamine biosynthesis lipoprotein ApbE rbh
S1_scaffold_787_curated_15
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18316..20220)
DNA (1905bp) protein (635aa)
Oxidoreductase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWX2_9RHIZ rbh
Oxidoreductase {ECO:0000313|EMBL:EYR79382.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
oxidoreductase, FAD/NAD(P)-binding protein rbh
Displaying 15 items

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