ggKbase home page

S1_scaffold_1324_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_1324_curated_1
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..594)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) RepID=Q3J6A5_RHOS4
hypothetical protein
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence {ECO:0000313|EMBL:ABA77679.1}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM; 158).;"
S1_scaffold_1324_curated_2
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(603..2144)
DNA (1542bp) protein (514aa)
Membrane bound O-acyl transferase, MBOAT family protein n=1 Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=B9KRH1_RHOSK rbh
membrane bound O-acyl transferase, MBOAT family protein rbh
Membrane bound O-acyl transferase, MBOAT family protein {ECO:0000313|EMBL:ACM02785.1}; TaxID=557760 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain KD131 / KCTC 12085).;"
S1_scaffold_1324_curated_3
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2528..2764)
DNA (237bp) protein (79aa)
UPI0003CE7295 related cluster n=1 Tax=unknown RepID=UPI0003CE7295
Uncharacterized protein {ECO:0000313|EMBL:ESW76143.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
putative transposase
S1_scaffold_1324_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3259..4272)
DNA (1014bp) protein (338aa)
Acyl dehydratase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUL5_9RHIZ rbh
MaoC-like dehydratase {ECO:0000313|EMBL:KFC74638.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
MaoC domain-containing protein dehydratase rbh
S1_scaffold_1324_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4287..5384)
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IBV5_BEII9 rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GTP-dependent nucleic acid-binding protein EngD rbh
S1_scaffold_1324_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5591..6196
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EHC2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFC74636.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S1_scaffold_1324_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6331..6945)
DNA (615bp) protein (205aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29) rbh
peptidyl-tRNA hydrolase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034C383F rbh
S1_scaffold_1324_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7073..7690)
DNA (618bp) protein (206aa)
50S ribosomal protein L25 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUM1_9RHIZ
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
50S ribosomal protein L25/general stress protein Ctc
S1_scaffold_1324_curated_9
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7851..9704)
DNA (1854bp) protein (618aa)
Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YFA8_MOBAS rbh
Uncharacterized protein {ECO:0000313|EMBL:KKC35415.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
diguanylate cyclase rbh
S1_scaffold_1324_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9814..10377)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E13DCC
Uncharacterized protein {ECO:0000313|EMBL:KFC74632.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S1_scaffold_1324_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10374..11096)
DNA (723bp) protein (241aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
7-cyano-7-deazaguanine synthase n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=QUEC_METEP rbh
exsB; regulator, ATP-binding rbh
S1_scaffold_1324_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11107..12051)
DNA (945bp) protein (315aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1) rbh
Ribose-phosphate pyrophosphokinase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUM3_9RHIZ rbh
Displaying 12 items

View Taxonomy