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S1_scaffold_1013_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_1013_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..300)
DNA (300bp) protein (100aa)
Probable intracellular septation protein A n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZ71_9RHIZ
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
intracellular septation protein A
S1_scaffold_1013_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(297..1577)
DNA (1281bp) protein (427aa)
Signal recognition particle receptor FtsY n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZ72_9RHIZ rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
signal recognition particle-docking protein FtsY rbh
S1_scaffold_1013_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1648..2397
DNA (750bp) protein (250aa)
Pseudouridine synthase {ECO:0000313|EMBL:KFC68135.1}; EC=5.4.99.- {ECO:0000313|EMBL:KFC68135.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Pseudouridine synthase n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KQM4_METC4 rbh
pseudouridine synthase rbh
S1_scaffold_1013_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2497..3132
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNB091 RepID=UPI000373279E
Uncharacterized protein {ECO:0000313|EMBL:KFC68134.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S1_scaffold_1013_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3129..4292
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003636EA2
Uncharacterized protein {ECO:0000313|EMBL:KFC68133.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
protein involved in cellulose biosynthesis (CelD)-like protein
S1_scaffold_1013_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4313..4609)
DNA (297bp) protein (99aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=PHS_BRASO
S1_scaffold_1013_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4606..5178)
DNA (573bp) protein (191aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003641ECE
2'-5' RNA ligase
S1_scaffold_1013_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5418..6473)
DNA (1056bp) protein (352aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMU4_9RHIZ rbh
Putative oxidoreductase, NADP(H)-dependent aldo-keto reductase {ECO:0000313|EMBL:KFC68130.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
aldo/keto reductase rbh
S1_scaffold_1013_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6555..7337)
DNA (783bp) protein (261aa)
acyl-CoA thioesterase (tesA-like) (EC:3.1.1.2)
Lysophospholipase L1-like esterase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMU5_9RHIZ
Putative esterase {ECO:0000313|EMBL:KFC68129.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S1_scaffold_1013_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7344..8045
DNA (702bp) protein (234aa)
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMU6_9RHIZ rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFC68128.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein rbh
S1_scaffold_1013_curated_11
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9872..10936
DNA (1065bp) protein (355aa)
type IV secretion protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003609DA7 rbh
Type IV secretion system protein VirB10 {ECO:0000313|EMBL:ERF82168.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
avhB10; Type IV secretory pathway AvhB10 protein rbh
S1_scaffold_1013_curated_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10933..11964
DNA (1032bp) protein (344aa)
type IV secretion protein VirB11 n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036F6874 rbh
Type IV secretory pathway AvhB11 protein {ECO:0000313|EMBL:BAR63689.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
avhB11; Type IV secretory pathway AvhB11 protein rbh
S1_scaffold_1013_curated_13
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11930..13876
DNA (1947bp) protein (649aa)
Type IV secretion system protein VirD4 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IET8_9BRAD rbh
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:ERF82170.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative type IV secretory pathway protein VirD4 rbh
S1_scaffold_1013_curated_14
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13860..15032
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EUN9_BRASB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ39883.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Displaying 14 items

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