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S1_scaffold_1014_curated

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_1014_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..535)
DNA (534bp) protein (178aa)
short-chain dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000361FB77 rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KFC73379.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
short-chain dehydrogenase/reductase SDR
S1_scaffold_1014_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(519..1391)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E5D962 rbh
Putative NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain protein {ECO:0000313|EMBL:KFC73380.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
short-chain dehydrogenase/reductase SDR rbh
S1_scaffold_1014_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1634..2428
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037FC5EB rbh
Methyltransferase type 11 {ECO:0000313|EMBL:KFC73381.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Methyltransferase type 11
S1_scaffold_1014_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2446..4221)
DNA (1776bp) protein (592aa)
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:KFC73382.1}; EC=1.3.8.1 {ECO:0000313|EMBL:KFC73382.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Acyl-CoA dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ55_9RHIZ rbh
acyl-CoA dehydrogenase domain-containing protein rbh
S1_scaffold_1014_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4397..5377
DNA (981bp) protein (327aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ54_9RHIZ rbh
Sua5/YciO/YrdC/YwlC family protein rbh
S1_scaffold_1014_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5596..6495
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=1 Tax=Rhodovulum sp. PH10 RepID=J6JDW8_9RHOB rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC73384.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
LysR family transcriptional regulator rbh
S1_scaffold_1014_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6681..7913)
DNA (1233bp) protein (411aa)
Arabinose efflux permease family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ50_9RHIZ rbh
Putative MFS permease {ECO:0000313|EMBL:KFC73387.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
major facilitator superfamily protein rbh
S1_scaffold_1014_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8245..9540
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F0027F rbh
Cell wall hydrolase, SleB {ECO:0000313|EMBL:KFC73388.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cell wall hydrolase SleB
S1_scaffold_1014_curated_9
unknown

Not on your lists

comp(9596..9778)
DNA (183bp) protein (61aa)

This feature has no annotations

S1_scaffold_1014_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10109..10702
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9VXS8_METEP
Uncharacterized protein {ECO:0000313|EMBL:KFC73390.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S1_scaffold_1014_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10943..11209)
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC73394.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S1_scaffold_1014_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11218..11487)
DNA (270bp) protein (90aa)
Translation initiation factor IF-1 n=2 Tax=Xanthobacteraceae RepID=IF1_AZOC5
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
infA; translation initiation factor IF-1
S1_scaffold_1014_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11568..13082)
DNA (1515bp) protein (505aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LY13_METRJ rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:KFC73396.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DEAD/DEAH box helicase rbh
S1_scaffold_1014_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13364..13573)
DNA (210bp) protein (70aa)
Putative cold shock protein y4cH n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X4V2_RHIFR
Cold shock protein {ECO:0000313|EMBL:KFC73397.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cold shock protein y4cH
S1_scaffold_1014_curated_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13803..14513)
DNA (711bp) protein (237aa)
HAD hydrolase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A1555 rbh
DUMP phosphatase {ECO:0000313|EMBL:KFC73398.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
S1_scaffold_1014_curated_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14523..15578)
DNA (1056bp) protein (352aa)
Pyruvate phosphate dikinase {ECO:0000313|EMBL:KFC73400.1}; EC=2.7.9.1 {ECO:0000313|EMBL:KFC73400.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Pyruvate, phosphate dikinase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ43_9RHIZ
pyruvate phosphate dikinase
Displaying 16 items

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