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S1_scaffold_2008_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_2008_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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107..1093
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037F2095 rbh
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family {ECO:0000313|EMBL:KFC70433.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
TRAP dicarboxylate transporter-DctP subunit rbh
S1_scaffold_2008_curated_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1119..1898
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N6G7_RHOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE28089.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
S1_scaffold_2008_curated_3
unknown

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2053..2337
DNA (285bp) protein (95aa)

This feature has no annotations

S1_scaffold_2008_curated_4
bacterium YEK0313, Bacteria

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2393..2644
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BVC0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CEJ12913.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
S1_scaffold_2008_curated_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2697..3455
DNA (759bp) protein (253aa)
Precorrin-6A synthase (Deacetylating) n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q217I3_RHOPB rbh
Precorrin 6A synthase {ECO:0000313|EMBL:KIZ46497.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
precorrin 6A synthase rbh
S1_scaffold_2008_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3517..4359
DNA (843bp) protein (281aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC:2.3.1.117) rbh
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUN9_9RHIZ rbh
S1_scaffold_2008_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4501..5061)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JI91_HYPSM
Putative membrane protein {ECO:0000313|EMBL:KFC63302.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S1_scaffold_2008_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5157..6650)
DNA (1494bp) protein (498aa)
Arabinose efflux permease family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z303_9RHIZ rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:KFC63303.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
major facilitator transporter rbh
S1_scaffold_2008_curated_9
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6787..7233)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J7W0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB34046.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
Transcriptional repressor
S1_scaffold_2008_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7364..7894
DNA (531bp) protein (177aa)
Isochorismatase hydrolase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WPW8_9RHIZ
Isochorismatase hydrolase {ECO:0000313|EMBL:KFC62173.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Isochorismatase hydrolase
S1_scaffold_2008_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8113..8412)
DNA (300bp) protein (100aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXT2_9RHIZ
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:KFC62169.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
inner-membrane translocator
Displaying 11 items

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