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S1_scaffold_1234_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_1234_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..534)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000379633B
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
MlrC domain-containing protein
S1_scaffold_1234_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(816..1664)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035F7E4A rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:KFC65365.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
binding-protein-dependent transport systems inner membrane component rbh
S1_scaffold_1234_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1664..2608)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003667797 rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:KFC65364.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
binding-protein-dependent transport systems inner membrane component rbh
S1_scaffold_1234_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2819..4357)
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000372220C rbh
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:KFC65363.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
extracellular solute-binding protein rbh
S1_scaffold_1234_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4415..5446)
DNA (1032bp) protein (344aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MN31_9RHIZ rbh
Putative Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:KFC65362.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
succinylglutamatedesuccinylase/aspartoacylase rbh
S1_scaffold_1234_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5525..6283
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036EA793
Transcriptional regulator, GntR family {ECO:0000313|EMBL:KFC65361.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GntR family transcriptional regulator
S1_scaffold_1234_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6280..7476
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000370B563 rbh
Enolase superfamily enzyme {ECO:0000313|EMBL:KFC65360.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
mandelate racemase/muconate lactonizing protein rbh
S1_scaffold_1234_curated_8
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7651..9018)
DNA (1368bp) protein (456aa)
C4-dicarboxylate transport transcriptional regulatory protein DctD n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVD9_9PROT rbh
C4-dicarboxylate transport transcriptional regulatory protein DctD {ECO:0000313|EMBL:EHM03012.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
Fis family two component sigma-54 specific transcriptional regulator rbh
S1_scaffold_1234_curated_9
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9015..10835)
DNA (1821bp) protein (607aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
dctB; C4-dicarboxylate transport sensor protein (EC:2.7.3.-) rbh
Signal transduction histidine kinase regulating C4-dicarboxylate transport system n=1 Tax=Rhizobium sp. CF142 RepID=J2ANV3_9RHIZ rbh
S1_scaffold_1234_curated_10
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11044..12378
DNA (1335bp) protein (445aa)
C4-dicarboxylate transport protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVE1_9PROT rbh
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
dctA; C4-dicarboxylate transport protein rbh
S1_scaffold_1234_curated_11
unknown

Not on your lists

comp(12467..12643)
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying 11 items

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