name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S1_scaffold_77_curated_1
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
421..1170
|
Uncharacterized protein {ECO:0000313|EMBL:AKF50357.1}; TaxID=1324932 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. syringae HS191.;"
|
|
S1_scaffold_77_curated_2
Serratia liquefaciens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1154..1936
|
Uncharacterized protein {ECO:0000313|EMBL:GAK29406.1}; TaxID=1460083 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia liquefaciens FK01.;"
|
|
S1_scaffold_77_curated_3
Serratia liquefaciens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1936..2718
|
Uncharacterized protein {ECO:0000313|EMBL:GAK29407.1}; TaxID=1460083 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia liquefaciens FK01.;"
|
|
S1_scaffold_77_curated_4
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2715..3626)
|
Transcriptional regulator, LysR family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNR0_POLNA
rbh
LysR family transcriptional regulator
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_5
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3763..4503
|
HAD-superfamily hydrolase, subfamily IA, variant 3 id=1311492 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
HAD family hydrolase
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_6
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4561..5259
|
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
rbh
ribulose-phosphate 3-epimerase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002F742F1
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_7
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5286..6389
|
Fructose-1,6-bisphosphatase class 1 1 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=F16A1_RHOFD
rbh
inositol phosphatase/fructose-1,6-bisphosphatase
rbh
Tax=CG_Rhodof_01
|
|
S1_scaffold_77_curated_8
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6523..7398
|
phosphoribulokinase (EC:2.7.1.19)
rbh
Phosphoribulokinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YM8_RHOFD
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_9
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7543..9624
|
Transketolase id=1311488 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
transketolase
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_10
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9637..10314
|
Phosphoglycolate phosphatase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNR6_POLNA
phosphoglycolate phosphatase
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_11
uncultured bacterium, Bacteria
|
Not on your lists |
10379..11389
|
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DI10_9BACT
rbh
gapA; glyceraldehyde 3-phosphate dehydrogenase
rbh
|
|
S1_scaffold_77_curated_12
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11392..12585
|
Phosphoglycerate kinase n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N9Z0_9BURK
rbh
pgk; phosphoglycerate kinase
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_13
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12767..13804
|
cbbA2; fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
rbh
fructose-bisphosphate aldolase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00030F159C
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_14
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13896..14591)
|
TetR family transcriptional regulator n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI0003720CC5
bacterial regulatory s, tetR family protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_15
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14720..15031
|
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13J81_BURXL
hypothetical protein
Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
|
|
S1_scaffold_77_curated_16
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15263..16591
|
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000371C061
rbh
bacterial extracellular solute-binding family protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_17
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16657..17574
|
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00036F6CBE
rbh
binding--dependent transport system inner membrane component family protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_18
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17607..18515
|
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13J89_BURXL
rbh
binding--dependent transport system inner membrane component family protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_19
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18528..19625
|
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13J88_BURXL
rbh
ABC transporter family protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_20
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19635..20501
|
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00036E683B
FAD binding domain in molybdopterin dehydrogenase family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
|
|
S1_scaffold_77_curated_21
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20507..21010
|
(2Fe-2S)-binding protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000372A199
[2Fe-2S] binding domain protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_22
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20997..23369
|
xanthine dehydrogenase n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00035FACEA
rbh
molybdopterin-binding domain of aldehyde dehydrogenase family protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_23
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23373..24251
|
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00037D9414
rbh
NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
|
|
S1_scaffold_77_curated_24
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24255..24893
|
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000374711F
putative Carbon monoxide dehydrogenase, coxG accessory protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_25
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24925..26301
|
L-serine dehydratase 1 (EC:4.3.1.17)
rbh
L-serine ammonia-lyase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21ZH8_RHOFD
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_26
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26314..27507
|
Amidohydrolase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8M8_ACIDE
rbh
hippurate hydrolase
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_77_curated_27
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27684..28823
|
Extracellular ligand-binding receptor n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQ13_ACCPU
rbh
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:KFB70619.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
Extracellular ligand-binding receptor
rbh
|
|
S1_scaffold_77_curated_28
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28854..32372
|
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21ZN9_RHOFD
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=CG_Rhodof_04
|
|
S1_scaffold_77_curated_29
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32387..33166)
|
hypothetical protein id=5080150 bin=GWF1_Burkholderiales_GWF1_66_17 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
NYN domain-containing protein
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S1_scaffold_77_curated_30
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33362..34393
|
Extracellular protease n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q2B9_9DELT
rbh
Peptidase M35 {ECO:0000313|EMBL:KFA91474.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
extracellular protease
|