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S1_scaffold_318_curated

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_318_curated_1
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..601
DNA (600bp) protein (200aa)
NUDIX hydrolase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YX1_RHOFD
ntpA; dATP pyrophosphohydrolase
Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
S1_scaffold_318_curated_2
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

598..1332
DNA (735bp) protein (245aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YX0_RHOFD rbh
endonuclease/exonuclease/phosphatase rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_3
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1341..2555
DNA (1215bp) protein (405aa)
Phospholipase D/Transphosphatidylase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YW9_RHOFD rbh
phospholipase D/transphosphatidylase rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_4
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2660..3361
DNA (702bp) protein (234aa)
GTP cyclohydrolase I (EC:3.5.4.16) rbh
GTP cyclohydrolase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YW8_RHOFD rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3364..3786
DNA (423bp) protein (141aa)
Bluf domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXZ5_9BURK
bluf domain-containing protein
Tax=CG_Rhodof_04
S1_scaffold_318_curated_6
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4003..4644
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037DCD04 rbh
hypothetical protein rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_7
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4641..5138
DNA (498bp) protein (166aa)
Nuclease (SNase-like) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YW3_RHOFD
nuclease
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_8
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5146..5913)
DNA (768bp) protein (256aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YW2_RHOFD rbh
UBA/THIF-type NAD/FAD-binding protein rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_9
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5922..7394)
DNA (1473bp) protein (491aa)
carboxyl-terminal protease (EC:3.4.21.102) rbh
Carboxyl-terminal protease n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YW1_RHOFD rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_10
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7479..8222)
DNA (744bp) protein (248aa)
gpmA; phosphoglyceromutase (EC:5.4.2.1) rbh
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Acidovorax sp. (strain JS42) RepID=GPMA_ACISJ rbh
Tax=CG_Rhodof_03
S1_scaffold_318_curated_11
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8319..8726
DNA (408bp) protein (136aa)
Rhodanese-related sulfurtransferase n=1 Tax=Acidovorax sp. CF316 RepID=J1EAG1_9BURK
rhodanese-like protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_12
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8742..9002
DNA (261bp) protein (87aa)
Glutaredoxin 3 n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KPJ9_9BURK
grxC; glutaredoxin
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_13
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9073..9531
DNA (459bp) protein (153aa)
Protein-export protein SecB n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGB5_9BURK
preprotein translocase subunit SecB
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_14
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9582..10607
DNA (1026bp) protein (342aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94) rbh
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=GPDA_RHOFD rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_15
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10638..11516
DNA (879bp) protein (293aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19) rbh
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YV1_RHOFD rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_16
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11565..12680
DNA (1116bp) protein (372aa)
Quinolinate synthetase A n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YV0_RHOFD rbh
quinolinate synthetase rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_17
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12853..13758)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YJ4_RHOFD rbh
hypothetical protein rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_18
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13867..14862
DNA (996bp) protein (332aa)
Alcohol dehydrogenase, zinc-binding n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YJ1_RHOFD rbh
zinc-binding alcohol dehydrogenase rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_19
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14882..16588)
DNA (1707bp) protein (569aa)
Na/Pi cotransporter II-related n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YJ0_RHOFD rbh
Na/Pi cotransporter II-like protein rbh
Na/Pi cotransporter II-related {ECO:0000313|EMBL:ABD69163.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S1_scaffold_318_curated_20
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16621..17121)
DNA (501bp) protein (167aa)
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YI9_RHOFD
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_21
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17121..20015)
DNA (2895bp) protein (965aa)
Isoleucine--tRNA ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YI8_RHOFD rbh
isoleucyl-tRNA synthetase rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_22
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20005..20991)
DNA (987bp) protein (329aa)
ribC, ribF; bifunctional riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2) rbh
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2DW28_9BACT rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_23
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21161..21718
DNA (558bp) protein (186aa)
HNH endonuclease n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YI6_RHOFD rbh
HNH endonuclease rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_24
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21804..22697
DNA (894bp) protein (298aa)
DNA ligase (EC:6.5.1.1) rbh
ATP dependent DNA ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YI4_RHOFD rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_25
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22703..23287
DNA (585bp) protein (195aa)
Transcription elongation factor GreB n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KP20_9BURK
greB; transcription elongation factor GreB
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_318_curated_26
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23424..23738
DNA (315bp) protein (105aa)
Transport-associated n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RA1_RHOFD
transport protein
Tax=CG_Rhodof_02
S1_scaffold_318_curated_27
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23841..23987
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BEL8_CHLPD
hypothetical protein
Tax=CG_Rhodof_02
S1_scaffold_318_curated_28
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24024..25775
DNA (1752bp) protein (584aa)
Putative prolin-rich exported protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PUX4_9RHOO rbh
putative prolin-rich exported protein rbh
Putative prolin-rich exported protein {ECO:0000313|EMBL:BAL24325.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
S1_scaffold_318_curated_29
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25945..26670
DNA (726bp) protein (242aa)
Fe-S-cluster-containing hydrogenase subunit n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QN21_AZOSU rbh
Fe-S-cluster-containing hydrogenase subunit rbh
Fe-S-cluster-containing hydrogenase subunit {ECO:0000313|EMBL:AEV26861.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
S1_scaffold_318_curated_30
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26673..27758
DNA (1086bp) protein (362aa)
Formate-dependent nitrite reductase, membrane component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QN22_AZOSU rbh
formate-dependent nitrite reductase, membrane component rbh
Formate-dependent nitrite reductase, membrane component {ECO:0000313|EMBL:AEV26862.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Displaying items 1-30 of 40 in total

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