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S1_scaffold_180_curated

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Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_180_curated_1
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..3504)
DNA (3504bp) protein (1168aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQW2_DELSC rbh
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EZP56872.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
multi-sensor hybrid histidine kinase rbh
S1_scaffold_180_curated_2
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3655..3915
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQW3_DELSC
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF92864.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_180_curated_3
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3941..4039
DNA (99bp) protein (33aa)
Uncharacterized protein {ECO:0000313|EMBL:EZP56870.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_180_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4337..5305)
DNA (969bp) protein (323aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1I4_DELAS rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABX38647.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_180_curated_5
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5550..6908
DNA (1359bp) protein (453aa)
beta-alanine--pyruvate transaminase (EC:2.6.1.18) rbh
Beta-alanine--pyruvate transaminase {ECO:0000313|EMBL:AEF92866.1}; EC=2.6.1.18 {ECO:0000313|EMBL:AEF92866.1};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
Beta-alanine--pyruvate transaminase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQW5_DELSC rbh
S1_scaffold_180_curated_6
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6989..8005)
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQW6_DELSC rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEF92867.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_180_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8119..9135)
DNA (1017bp) protein (339aa)
GntR domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1I7_DELAS rbh
GntR family transcriptional regulator rbh
GntR domain protein {ECO:0000313|EMBL:ABX38650.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_180_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9380..10585
DNA (1206bp) protein (402aa)
ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1I8_DELAS rbh
branched chain amino acid ABC transporter periplasmic ligand-binding protein rbh
ABC branched chain amino acid family transporter, periplasmic ligand binding protein {ECO:0000313|EMBL:ABX38651.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_180_curated_9
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10780..11640
DNA (861bp) protein (287aa)
Inner-membrane translocator n=3 Tax=Delftia RepID=A9C1I9_DELAS rbh
ABC transporter permease rbh
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:EZP56864.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_180_curated_10
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11646..12638
DNA (993bp) protein (331aa)
Inner-membrane translocator n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1J0_DELAS rbh
inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:EZP56863.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_180_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12635..13414
DNA (780bp) protein (260aa)
ABC transporter related n=3 Tax=Delftia RepID=A9C1J1_DELAS rbh
ABC transporter-like protein rbh
ABC transporter family protein {ECO:0000313|EMBL:KFJ13894.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_180_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13411..14121
DNA (711bp) protein (237aa)
ABC transporter related n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1J2_DELAS rbh
ABC transporter-like protein rbh
ABC transporter related {ECO:0000313|EMBL:ABX38655.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_180_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14154..15449
DNA (1296bp) protein (432aa)
amidase (EC:3.5.1.87) rbh
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:ABX38656.1}; EC=3.5.1.87 {ECO:0000313|EMBL:ABX38656.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Amidase, hydantoinase/carbamoylase family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1J3_DELAS rbh
S1_scaffold_180_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15446..16912
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WV34_DELAC rbh
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
MlrC domain-containing protein rbh
S1_scaffold_180_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17107..19416
DNA (2310bp) protein (770aa)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase n=2 Tax=Delftia RepID=A9C1J5_DELAS rbh
malic protein NAD-binding protein rbh
Malic enzyme, NAD binding domain protein {ECO:0000313|EMBL:KFJ13410.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_180_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19734..20153
DNA (420bp) protein (140aa)
Guanine-specific ribonuclease N1 and T1 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1J6_DELAS
guanine-specific ribonuclease N1 and T1
Guanine-specific ribonuclease N1 and T1 {ECO:0000313|EMBL:ABX38659.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_180_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20303..20728
DNA (426bp) protein (142aa)
Uncharacterized protein n=4 Tax=Delftia RepID=A9C1J7_DELAS
barnase inhibitor
Uncharacterized protein {ECO:0000313|EMBL:EPD40196.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
S1_scaffold_180_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20815..21606)
DNA (792bp) protein (264aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1J8_DELAS rbh
ksgA; dimethyladenosine transferase rbh
S1_scaffold_180_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21659..23086)
DNA (1428bp) protein (476aa)
Chaperone SurA n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQX9_DELSC rbh
chaperone surA rbh
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Flags: Precursor;; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_180_curated_20
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23128..25452)
DNA (2325bp) protein (775aa)
LPS-assembly protein LptD n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1K0_DELAS rbh
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
organic solvent tolerance protein rbh
S1_scaffold_180_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25656..26753
DNA (1098bp) protein (366aa)
Aminoglycoside phosphotransferase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1K1_DELAS rbh
aminoglycoside phosphotransferase rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABX38664.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_180_curated_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26767..27519
DNA (753bp) protein (251aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQY2_DELSC rbh
ribosomal RNA small subunit methyltransferase E rbh
S1_scaffold_180_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27506..28396)
DNA (891bp) protein (297aa)
Alpha/beta hydrolase fold n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1K3_DELAS rbh
alpha/beta hydrolase fold protein rbh
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABX38666.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_180_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28396..29904)
DNA (1509bp) protein (503aa)
Peptidase M20 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQY4_DELSC rbh
peptidase M20 rbh
Peptidase M20/M25/M40 family protein {ECO:0000313|EMBL:KFJ13947.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_180_curated_25
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29916..30413
DNA (498bp) protein (166aa)
Transcriptional regulator, MerR family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQY5_DELSC
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EZP56848.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
MerR family transcriptional regulator
S1_scaffold_180_curated_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30465..31115
DNA (651bp) protein (217aa)
NAD(P)H dehydrogenase (Quinone) n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1K6_DELAS rbh
NAD(P)H dehydrogenase rbh
NAD(P)H dehydrogenase (Quinone) {ECO:0000313|EMBL:ABX38669.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_180_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31099..32262)
DNA (1164bp) protein (388aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQY7_DELSC rbh
Glycerophosphoryl diester phosphodiesterase family protein {ECO:0000313|EMBL:KFJ13554.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
glycerophosphoryl diester phosphodiesterase rbh
S1_scaffold_180_curated_28
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32335..32919)
DNA (585bp) protein (195aa)
Methionine biosynthesis protein MetW n=4 Tax=Delftia RepID=A9C1K8_DELAS rbh
methionine biosynthesis protein MetW rbh
Methionine biosynthesis protein MetW {ECO:0000313|EMBL:EZP56845.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_180_curated_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32916..34064)
DNA (1149bp) protein (383aa)
metX; homoserine O-acetyltransferase (EC:2.3.1.31) rbh
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Homoserine O-acetyltransferase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1K9_DELAS rbh
S1_scaffold_180_curated_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34171..34785)
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9C1L0_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX38673.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Displaying items 1-30 of 63 in total

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