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S1_scaffold_71_curated

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Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_71_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

580..1536
DNA (957bp) protein (319aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9BSS5_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX34080.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_71_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1542..2975)
DNA (1434bp) protein (478aa)
Fumarate lyase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BSS6_DELAS rbh
fumC; fumarate hydratase rbh
Fumarate lyase {ECO:0000313|EMBL:ABX34081.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_71_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2980..3972)
DNA (993bp) protein (331aa)
Uncharacterized protein n=4 Tax=Delftia RepID=A9BSS7_DELAS rbh
hypothetical protein rbh
Tripartite tricarboxylate transporter receptor family protein {ECO:0000313|EMBL:KFJ10946.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_71_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4017..5399)
DNA (1383bp) protein (461aa)
3-carboxy-cis,cis-muconate cycloisomerase {ECO:0000313|EMBL:KFJ08924.1}; EC=5.5.1.2 {ECO:0000313|EMBL:KFJ08924.1};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
3-carboxy-cis,cis-muconate cycloisomerase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BSS8_DELAS rbh
3-carboxy-cis,cis-muconate cycloisomerase rbh
S1_scaffold_71_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5497..6243
DNA (747bp) protein (249aa)
Transcriptional regulator, GntR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BSS9_DELAS rbh
GntR family transcriptional regulator rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABX34084.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_71_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6240..8096)
DNA (1857bp) protein (619aa)
ABC transporter related n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BST0_DELAS rbh
ABC transporter related {ECO:0000313|EMBL:ABX34085.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
ABC transporter-like protein rbh
S1_scaffold_71_curated_7
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8236..8367)
DNA (132bp) protein (44aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AVH2_DELSC
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF92061.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_71_curated_8
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8410..9327)
DNA (918bp) protein (306aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
cysteine synthase (EC:2.5.1.47) rbh
Cysteine synthase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AVH1_DELSC rbh
S1_scaffold_71_curated_9
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9468..10403
DNA (936bp) protein (312aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BST2_DELAS rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EZP54227.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
LysR family transcriptional regulator rbh
S1_scaffold_71_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10424..11794)
DNA (1371bp) protein (457aa)
Amidase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BST3_DELAS rbh
amidase rbh
Amidase {ECO:0000313|EMBL:ABX34088.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_71_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11845..12522)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AVG8_DELSC rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KFJ10104.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_71_curated_12
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12610..13929)
DNA (1320bp) protein (440aa)
Major facilitator superfamily MFS_1 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AVG7_DELSC rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEF92056.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_71_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14203..15102)
DNA (900bp) protein (300aa)
Uncharacterized protein n=3 Tax=Delftia RepID=A9BST6_DELAS rbh
hypothetical protein rbh
EamA-like transporter family protein {ECO:0000313|EMBL:KFJ09026.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_71_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15199..15993
DNA (795bp) protein (265aa)
Transcriptional regulator, AraC family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AVG5_DELSC rbh
AraC family transcriptional regulator rbh
Helix-turn-helix domain protein {ECO:0000313|EMBL:KFJ09610.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_71_curated_15
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16520..18994)
DNA (2475bp) protein (825aa)
TonB-dependent siderophore receptor n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AVG4_DELSC rbh
Iron complex outermembrane recepter protein {ECO:0000313|EMBL:EZP54233.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
TonB-dependent siderophore receptor rbh
S1_scaffold_71_curated_16
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19149..20471)
DNA (1323bp) protein (441aa)
Anti-FecI sigma factor, FecR n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AVG3_DELSC rbh
anti-FecI sigma factor FecR rbh
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEF92052.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_71_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20567..21310)
DNA (744bp) protein (248aa)
RNA-binding S4 domain protein n=4 Tax=Delftia RepID=A9BUI7_DELAS rbh
RNA-binding S4 domain-containing protein rbh
23S rRNA synthase {ECO:0000313|EMBL:EPD38977.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
S1_scaffold_71_curated_18
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21374..23086)
DNA (1713bp) protein (571aa)
NUDIX hydrolase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AVG1_DELSC rbh
NUDIX hydrolase {ECO:0000313|EMBL:AEF92050.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
NUDIX hydrolase rbh
S1_scaffold_71_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23160..24020
DNA (861bp) protein (287aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
Diaminopimelate epimerase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AVG0_DELSC rbh
diaminopimelate epimerase rbh
S1_scaffold_71_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24017..24730
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9BUJ0_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KFJ11463.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_71_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24745..25842
DNA (1098bp) protein (366aa)
Tyrosine recombinase XerC n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BUJ1_DELAS rbh
integrase family protein rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_71_curated_22
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25977..27092
DNA (1116bp) protein (372aa)
Cobalamin synthesis protein P47K n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AVF7_DELSC rbh
cobalamin synthesis protein P47K rbh
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:AEF92046.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_71_curated_23
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26903..27574)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EF30_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EZP54241.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_71_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27624..28118
DNA (495bp) protein (165aa)
RNA polymerase-binding transcription factor DksA n=2 Tax=Delftia RepID=A9BUJ3_DELAS rbh
TraR/DksA family transcriptional regulator rbh
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_71_curated_25
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28164..29945
DNA (1782bp) protein (594aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AVF5_DELSC rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEF92044.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
hypothetical protein rbh
S1_scaffold_71_curated_26
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30069..30614
DNA (546bp) protein (182aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
ATP-dependent protease subunit HslV n=2 Tax=Delftia RepID=HSLV_DELAS rbh
20S proteasome subunits A and B rbh
S1_scaffold_71_curated_27
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30744..32051
DNA (1308bp) protein (436aa)
ATP-dependent protease ATPase subunit HslU n=2 Tax=Delftia RepID=A9BUJ6_DELAS rbh
hslU; ATP-dependent protease ATP-binding subunit HslU rbh
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_71_curated_28
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32504..32848
DNA (345bp) protein (115aa)
Protein MraZ n=2 Tax=Delftia RepID=MRAZ_DELAS
protein mraZ
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_71_curated_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32864..33793
DNA (930bp) protein (310aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000255|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000255|HAMAP-Rule:MF_01007}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Ribosomal RNA small subunit methyltransferase H n=2 Tax=Delftia RepID=RSMH_DELAS rbh
mraW; S-adenosyl-methyltransferase MraW rbh
S1_scaffold_71_curated_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33831..34115
DNA (285bp) protein (95aa)
Cell division protein FtsL n=4 Tax=Delftia RepID=A9BUJ9_DELAS
cell division protein FtsL
Cell division protein FtsL {ECO:0000256|HAMAP-Rule:MF_00910}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
Displaying items 1-30 of 112 in total

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