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S1_scaffold_223_curated

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Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_223_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..552)
DNA (552bp) protein (184aa)
Putative transmembrane protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNH4_DELAS
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:ABX37869.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_223_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(941..2053)
DNA (1113bp) protein (371aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11) rbh
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNH3_DELAS rbh
S1_scaffold_223_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2442..3512)
DNA (1071bp) protein (357aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85) rbh
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
3-isopropylmalate dehydrogenase n=2 Tax=Delftia RepID=A9BNH2_DELAS rbh
S1_scaffold_223_curated_4
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3609..4262)
DNA (654bp) protein (218aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
3-isopropylmalate dehydratase small subunit n=2 Tax=Delftia RepID=LEUD_DELAS rbh
3-isopropylmalate dehydratase small subunit rbh
S1_scaffold_223_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4283..4408)
DNA (126bp) protein (42aa)
Entericidin EcnAB n=4 Tax=Delftia RepID=A9BNH0_DELAS
entericidin EcnAB
Entericidin EcnA/B family protein {ECO:0000313|EMBL:KFJ12331.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_223_curated_6
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4440..5861)
DNA (1422bp) protein (474aa)
isopropylmalate isomerase large subunit (EC:4.2.1.33) rbh
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNG9_DELAS rbh
S1_scaffold_223_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5925..6869)
DNA (945bp) protein (315aa)
Transcriptional regulator, LysR family n=2 Tax=Delftia RepID=A9BNG8_DELAS rbh
LysR family transcriptional regulator rbh
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KFJ12025.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_223_curated_8
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7161..8372
DNA (1212bp) protein (404aa)
Sel1 domain protein repeat-containing protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B1L3_DELSC rbh
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:EZP63706.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
Sel1 domain-containing protein repeat-containing protein rbh
S1_scaffold_223_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8442..9584)
DNA (1143bp) protein (381aa)
Chaperone protein DnaJ n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=DNAJ_DELAS rbh
chaperone protein DnaJ rbh
Chaperone protein DnaJ {ECO:0000255|HAMAP-Rule:MF_01152}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_223_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9685..11634)
DNA (1950bp) protein (650aa)
Chaperone protein DnaK n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=DNAK_DELAS rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
dnaK; molecular chaperone DnaK rbh
S1_scaffold_223_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11749..12294)
DNA (546bp) protein (182aa)
Protein GrpE n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=GRPE_DELAS rbh
heat shock protein GrpE rbh
Protein GrpE {ECO:0000255|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000255|HAMAP-Rule:MF_01151}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_223_curated_12
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12602..12964
DNA (363bp) protein (121aa)
30S ribosomal protein S6 n=5 Tax=cellular organisms RepID=RS6_DELAS
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_223_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12991..13281
DNA (291bp) protein (97aa)
Putative primosomal replication protein n=2 Tax=Delftia RepID=A9BNG2_DELAS
putative primosomal replication protein
Primosomal replication protein n {ECO:0000256|SAAS:SAAS00194886}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_223_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13300..13581
DNA (282bp) protein (94aa)
30S ribosomal protein S18 n=4 Tax=Delftia RepID=RS18_DELAS
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
S1_scaffold_223_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13593..14045
DNA (453bp) protein (151aa)
50S ribosomal protein L9 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=RL9_DELAS
50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000255|HAMAP-Rule:MF_00503}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_223_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14178..15611
DNA (1434bp) protein (478aa)
Replicative DNA helicase n=2 Tax=Delftia RepID=A9BNF9_DELAS rbh
replicative DNA helicase rbh
Replicative DNA helicase {ECO:0000313|EMBL:ABX37854.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_223_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15685..16083)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNF8_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX37853.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_223_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16087..17898)
DNA (1812bp) protein (604aa)
PhoH family protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B1M3_DELSC rbh
PhoH-like family protein {ECO:0000313|EMBL:KFJ11900.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
PhoH family protein rbh
S1_scaffold_223_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18075..18560)
DNA (486bp) protein (162aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=3 Tax=Delftia acidovorans RepID=A9BNF6_DELAS rbh
alkyl hydroperoxide reductase rbh
Peroxiredoxin Q/BCP {ECO:0000313|EMBL:EPD39578.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
S1_scaffold_223_curated_20
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18699..19136)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B1M5_DELSC
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF88426.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_223_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19238..20473
DNA (1236bp) protein (412aa)
aspartate transaminase (EC:2.6.1.1) rbh
Aspartate transaminase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B1M6_DELSC rbh
Aminotransferase class-V family protein {ECO:0000313|EMBL:KFJ12483.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_223_curated_22
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20582..21931
DNA (1350bp) protein (450aa)
Homoserine dehydrogenase (EC:1.1.1.3) rbh
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
Homoserine dehydrogenase n=2 Tax=Delftia RepID=A9BNF3_DELAS rbh
S1_scaffold_223_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22072..23499
DNA (1428bp) protein (476aa)
threonine synthase (EC:4.2.3.1) rbh
Threonine synthase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XMT1_DELAC rbh
Threonine synthase {ECO:0000313|EMBL:EPD46552.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
S1_scaffold_223_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23546..24106
DNA (561bp) protein (187aa)
Molybdopterin-guanine dinucleotide biosynthesis protein B n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNF1_DELAS rbh
molybdopterin-guanine dinucleotide biosynthesis protein B rbh
Molybdopterin-guanine dinucleotide biosynthesis protein B {ECO:0000313|EMBL:ABX37846.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_223_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24116..25351
DNA (1236bp) protein (412aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNF0_DELAS rbh
molybdenum cofactor synthesis domain-containing protein rbh
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ABX37845.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_223_curated_26
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25348..25623
DNA (276bp) protein (92aa)
Molybdopterin converting factor, subunit 1 n=2 Tax=Delftia RepID=F6B1N1_DELSC
molybdopterin converting factor subunit 1
Molybdopterin synthase sulfur carrier subunit {ECO:0000256|RuleBase:RU362014}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_223_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25629..25982
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WN28_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD39570.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
S1_scaffold_223_curated_28
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25928..26863)
DNA (936bp) protein (312aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
dihydrodipicolinate synthase (EC:4.2.1.52) rbh
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B1N3_DELSC rbh
S1_scaffold_223_curated_29
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27159..27503)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B1N4_DELSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP63685.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_223_curated_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27512..27766)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9BNE5_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFJ11949.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
Displaying items 1-30 of 57 in total

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