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S1_scaffold_705_curated

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_705_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..99
DNA (99bp) protein (33aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
Histidine kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BR18_DELAS
integral membrane sensor signal transduction histidine kinase
S1_scaffold_705_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115..552)
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=A9BR17_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX32972.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_705_curated_3
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(824..1240)
DNA (417bp) protein (139aa)
GCN5-related N-acetyltransferase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AL10_DELSC
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEF87372.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_705_curated_4
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1345..2298)
DNA (954bp) protein (318aa)
Mannosyltransferase OCH1-related enzyme n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AL09_DELSC rbh
mannosyltransferase OCH1-like protein rbh
Mannosyltransferase OCH1-related enzyme {ECO:0000313|EMBL:AEF87371.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_705_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2295..3332)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WFR9_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD38131.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
family 2 glycosyl transferase rbh
S1_scaffold_705_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3329..4450)
DNA (1122bp) protein (374aa)
Glycosyl transferase group 1 n=2 Tax=Delftia RepID=F6AL07_DELSC rbh
group 1 glycosyl transferase rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD38132.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
S1_scaffold_705_curated_7
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4447..5739)
DNA (1293bp) protein (431aa)
O-antigen polymerase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AL06_DELSC rbh
O-antigen polymerase rbh
O-antigen polymerase {ECO:0000313|EMBL:AEF87368.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_705_curated_8
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5847..6713
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BR09_DELAS rbh
Capsular polysaccharide synthesis {ECO:0000313|EMBL:EZP54517.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein rbh
S1_scaffold_705_curated_9
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6745..6954)
DNA (210bp) protein (70aa)
Uncharacterized protein n=4 Tax=Delftia RepID=A9BR08_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP54518.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_705_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6990..7928)
DNA (939bp) protein (313aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KFJ13493.1}; EC=2.6.1.42 {ECO:0000313|EMBL:KFJ13493.1};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
branched-chain amino acid aminotransferase (EC:2.6.1.42) rbh
Branched-chain amino acid aminotransferase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AL03_DELSC rbh
S1_scaffold_705_curated_11
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7973..8410)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BR06_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP54520.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_705_curated_12
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8490..9920)
DNA (1431bp) protein (477aa)
DNA repair protein radA n=2 Tax=Delftia RepID=A9BR05_DELAS rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
DNA repair protein RadA rbh
S1_scaffold_705_curated_trna_1
unknown

Not on your lists

10019..10099
DNA (81bp)
transferRNA Met
S1_scaffold_705_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10163..10975)
DNA (813bp) protein (271aa)
predicted protein n=1 Tax=Populus trichocarpa RepID=UPI000194000D rbh
FAD-binding 9 siderophore-interacting domain-containing protein rbh
FAD-binding 9 siderophore-interacting domain protein {ECO:0000313|EMBL:ABX32959.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_705_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11072..11512
DNA (441bp) protein (147aa)
Transcriptional regulator, MarR family n=2 Tax=Delftia RepID=A9BR03_DELAS
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABX32958.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_705_curated_15
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11513..12616)
DNA (1104bp) protein (368aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
alanine racemase (EC:5.1.1.1) rbh
Alanine racemase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AKZ8_DELSC rbh
S1_scaffold_705_curated_16
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12751..14052
DNA (1302bp) protein (434aa)
Major facilitator superfamily MFS_1 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AKZ7_DELSC rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEF87359.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_705_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14251..15150
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BR00_DELAS rbh
EamA-like transporter family protein {ECO:0000313|EMBL:KFJ13571.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein rbh
S1_scaffold_705_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15202..15720)
DNA (519bp) protein (173aa)
AmiS/UreI transporter n=2 Tax=Delftia RepID=A9BQZ9_DELAS rbh
AmiS/UreI transporter rbh
AmiS/UreI transporter {ECO:0000313|EMBL:ABX32954.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_705_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16029..16895)
DNA (867bp) protein (289aa)
ProQ activator of osmoprotectant transporter ProP n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQZ8_DELAS rbh
ProQ activator of osmoprotectant transporter ProP rbh
ProQ activator of osmoprotectant transporter ProP {ECO:0000313|EMBL:ABX32953.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_705_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16980..18230)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQZ7_DELAS rbh
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
glcF; glycolate oxidase iron-sulfur subunit rbh
S1_scaffold_705_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18292..19074)
DNA (783bp) protein (261aa)
Uncharacterized protein n=3 Tax=Delftia RepID=A9BQZ6_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KFJ13604.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_705_curated_22
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19100..20242)
DNA (1143bp) protein (381aa)
FAD linked oxidase domain protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AKZ1_DELSC rbh
FAD linked oxidase domain-containing protein rbh
Glycolate oxidase {ECO:0000313|EMBL:KEH07035.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
S1_scaffold_705_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20435..21718)
DNA (1284bp) protein (428aa)
Ammonium transporter n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQZ4_DELAS rbh
ammonium transporter rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Displaying 24 items

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