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S1_scaffold_132_curated

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Displaying items 1-30 of 95 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_132_curated_1
unknown

Not on your lists

2..76
DNA (75bp) protein (25aa)

This feature has no annotations

S1_scaffold_132_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116..427
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WK92_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD40143.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
S1_scaffold_132_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

424..1005
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X4V5_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD40142.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
prophage LambdaSo, lysozyme
S1_scaffold_132_curated_4
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1002..1250
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X6P9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH13772.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
S1_scaffold_132_curated_5
unknown

Not on your lists

comp(1135..1767)
DNA (633bp) protein (211aa)

This feature has no annotations

S1_scaffold_132_curated_6
Physcomitrella patens, Physcomitrella, Funariales, Funariidae, Streptophyta, Viridiplantae

Not on your lists

comp(1840..2841)
DNA (1002bp) protein (334aa)
Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U7C5_PHYPA
Predicted protein {ECO:0000313|EMBL:EDQ48428.1}; Flags: Fragment;; TaxID=3218 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella.;" source="Physcomitrella patens subsp. patens (Moss).;"
S1_scaffold_132_curated_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3702..3959
DNA (258bp) protein (86aa)
aldehyde-activating protein n=1 Tax=Rhizobium giardinii RepID=UPI000360380E
glutathione-dependent formaldehyde-activating protein
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:ACS58755.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
S1_scaffold_132_curated_8
unknown

Not on your lists

comp(4184..5227)
DNA (1044bp) protein (348aa)

This feature has no annotations

S1_scaffold_132_curated_9
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5712..6398
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0D8_DELAS
Uncharacterized protein {ECO:0000313|EMBL:KEH06897.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
S1_scaffold_132_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6451..6549)
DNA (99bp) protein (33aa)
Putative membrane protein {ECO:0000313|EMBL:KFJ12706.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_132_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7265..7507)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AMF5_DELSC
Uncharacterized protein {ECO:0000313|EMBL:KFJ12976.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
S1_scaffold_132_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7642..7929
DNA (288bp) protein (96aa)
Histone family protein nucleoid-structuring protein H-NS n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AMF6_DELSC
histone family protein nucleoid-structuring protein H-NS
H-NS histone family protein {ECO:0000313|EMBL:KFJ12953.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_132_curated_13
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8343..8540)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AMF8_DELSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP55856.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_132_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8956..9744
DNA (789bp) protein (263aa)
Methyltransferase type 11 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AMF9_DELSC rbh
Methyltransferase domain protein {ECO:0000313|EMBL:KFJ12612.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
type 11 methyltransferase rbh
S1_scaffold_132_curated_15
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9794..10075)
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9C0D4_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP55854.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_132_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10227..10505)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0D3_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX36699.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_132_curated_17
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10502..10684)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0D2_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP52786.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_132_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10836..11231)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0D1_DELAS
Uncharacterized protein {ECO:0000313|EMBL:KFJ13035.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
S1_scaffold_132_curated_19
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12066..13265
DNA (1200bp) protein (400aa)
Cytochrome oxidase assembly n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AMG5_DELSC rbh
cytochrome oxidase assembly rbh
Cytochrome oxidase assembly {ECO:0000313|EMBL:AEF89748.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_132_curated_20
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13262..14167
DNA (906bp) protein (302aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
Protoheme IX farnesyltransferase n=2 Tax=Delftia RepID=A9C0C9_DELAS rbh
protoheme IX farnesyltransferase rbh
S1_scaffold_132_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14242..14778)
DNA (537bp) protein (179aa)
Two component transcriptional regulator, Fis family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AMG7_DELSC rbh
two component Fis family transcriptional regulator rbh
Bacterial regulatory , Fis family protein {ECO:0000313|EMBL:KFJ12820.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_132_curated_22
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14808..16109)
DNA (1302bp) protein (434aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AMG8_DELSC rbh
integral membrane sensor signal transduction histidine kinase rbh
S1_scaffold_132_curated_23
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16239..16952)
DNA (714bp) protein (238aa)
Surfeit locus 1 family protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AMG9_DELSC rbh
Surfeit locus 1 family protein {ECO:0000313|EMBL:EZP52780.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
surfeit locus 1 family protein rbh
S1_scaffold_132_curated_24
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17024..17464)
DNA (441bp) protein (147aa)
Cytochrome o ubiquinol oxidase subunit IV n=2 Tax=Delftia RepID=A9C0C5_DELAS rbh
cytochrome o ubiquinol oxidase subunit IV rbh
Cytochrome o ubiquinol oxidase subunit IV {ECO:0000313|EMBL:EZP52779.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_132_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17465..18097)
DNA (633bp) protein (211aa)
Cytochrome o ubiquinol oxidase, subunit III n=2 Tax=Delftia RepID=A9C0C4_DELAS rbh
cytochrome o ubiquinol oxidase subunit III rbh
Cytochrome o ubiquinol oxidase, subunit III {ECO:0000313|EMBL:KFJ13103.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_132_curated_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18090..20096)
DNA (2007bp) protein (669aa)
cytochrome o ubiquinol oxidase subunit I (EC:1.9.3.1) rbh
Cytochrome o ubiquinol oxidase, subunit I n=2 Tax=Delftia RepID=F6AMH2_DELSC rbh
Cytochrome o ubiquinol oxidase, subunit I {ECO:0000313|EMBL:KFJ13064.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_132_curated_27
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20163..21209)
DNA (1047bp) protein (349aa)
Ubiquinol oxidase, subunit II n=2 Tax=Delftia RepID=A9C0C2_DELAS rbh
ubiquinol oxidase subunit II rbh
Ubiquinol oxidase, subunit II {ECO:0000313|EMBL:EZP52776.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_132_curated_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21508..22845
DNA (1338bp) protein (446aa)
Major facilitator superfamily MFS_1 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0C1_DELAS rbh
major facilitator transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABX36687.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_132_curated_29
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22903..23253)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0C0_DELAS
Uncharacterized protein {ECO:0000313|EMBL:KEH13405.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
S1_scaffold_132_curated_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23687..26311
DNA (2625bp) protein (875aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7) rbh
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_00036};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Alanine--tRNA ligase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=SYA_DELAS rbh
Displaying items 1-30 of 95 in total

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