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S1_scaffold_13_curated

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Displaying items 1-30 of 237 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_13_curated_1
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..496
DNA (495bp) protein (165aa)
predicted protein, partial n=1 Tax=Populus trichocarpa RepID=UPI000193E82A
Uncharacterized protein {ECO:0000313|EMBL:EZP54102.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein
S1_scaffold_13_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

510..4868
DNA (4359bp) protein (1453aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BX64_DELAS rbh
Cna B-type domain protein {ECO:0000313|EMBL:KFJ12413.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein rbh
S1_scaffold_13_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4972..9144
DNA (4173bp) protein (1391aa)
YD repeat protein n=2 Tax=cellular organisms RepID=A9BX63_DELAS rbh
YD repeat-containing protein rbh
YD repeat protein {ECO:0000313|EMBL:ABX38139.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_13_curated_4
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10513..10791
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AWQ9_DELSC
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF88134.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_13_curated_5
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11371..12696
DNA (1326bp) protein (442aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=S2X2I3_DELAC rbh
MFS transporter permease {ECO:0000313|EMBL:KEH10646.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
major facilitator transporter rbh
S1_scaffold_13_curated_6
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12771..13523
DNA (753bp) protein (251aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AWR1_DELSC rbh
NGG1p interacting factor 3 protein, NIF3 rbh
S1_scaffold_13_curated_7
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13640..14701
DNA (1062bp) protein (354aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262) rbh
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AWR2_DELSC rbh
S1_scaffold_13_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14794..15222)
DNA (429bp) protein (143aa)
Large-conductance mechanosensitive channel n=5 Tax=Bacteria RepID=MSCL_DELAS
large conductance mechanosensitive channel protein
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
S1_scaffold_13_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15372..15968
DNA (597bp) protein (199aa)
ubiquinol-cytochrome c reductase, iron-sulfur subunit (EC:1.10.2.2) rbh
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=2 Tax=Delftia RepID=A9BX56_DELAS rbh
S1_scaffold_13_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15983..17398
DNA (1416bp) protein (472aa)
Cytochrome b n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AWR5_DELSC rbh
cytochrome b/b6 domain-containing protein rbh
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_13_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17416..18171
DNA (756bp) protein (252aa)
Cytochrome c1 n=2 Tax=Delftia RepID=A9BX54_DELAS rbh
cytochrome c1 rbh
Cytochrome c1 {ECO:0000313|EMBL:ABX38130.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_13_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18275..18886
DNA (612bp) protein (204aa)
Glutathione S-transferase domain n=5 Tax=Bacteria RepID=A9BX53_DELAS rbh
glutathione S-transferase domain-containing protein rbh
RNA polymerase-associated protein {ECO:0000313|EMBL:EPD43661.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
S1_scaffold_13_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18988..19518
DNA (531bp) protein (177aa)
Stringent starvation protein B n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP83_DELAS rbh
stringent starvation protein B rbh
Stringent starvation protein B {ECO:0000313|EMBL:ABX38128.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_13_curated_trna_1
unknown

Not on your lists

19617..19689
DNA (73bp)
transferRNA Thr
S1_scaffold_13_curated_14
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19762..20100)
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9BP82_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP54115.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_13_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20379..23126
DNA (2748bp) protein (916aa)
Protein translocase subunit SecA n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=SECA_DELAS rbh
preprotein translocase subunit SecA rbh
Protein translocase subunit SecA {ECO:0000255|HAMAP-Rule:MF_01382}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_13_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23277..24509
DNA (1233bp) protein (411aa)
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase (EC:2.3.1.1) rbh
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2Y355_DELAC rbh
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
S1_scaffold_13_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24675..25631
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP79_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX38124.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_13_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25682..26200
DNA (519bp) protein (173aa)
NUDIX hydrolase n=2 Tax=Delftia RepID=A9BP78_DELAS rbh
NUDIX hydrolase rbh
NUDIX hydrolase {ECO:0000313|EMBL:ABX38123.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_13_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26211..26390)
DNA (180bp) protein (60aa)
DNA gyrase inhibitor YacG n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP77_DELAS
hypothetical protein
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_13_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26459..27214)
DNA (756bp) protein (252aa)
Cell division protein ZapD n=2 Tax=Delftia RepID=A9BP76_DELAS rbh
hypothetical protein rbh
Cell division protein ZapD {ECO:0000256|HAMAP-Rule:MF_01092, ECO:0000256|SAAS:SAAS00004483}; Z ring-associated protein D {ECO:0000256|HAMAP-Rule:MF_01092}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_13_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27304..27948)
DNA (645bp) protein (215aa)
dephospho-CoA kinase (EC:2.7.1.24) rbh
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Dephospho-CoA kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP75_DELAS rbh
S1_scaffold_13_curated_22
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27963..28847)
DNA (885bp) protein (295aa)
prepilin peptidase (EC:3.4.23.43) rbh
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AWS7_DELSC rbh
S1_scaffold_13_curated_23
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28847..30064)
DNA (1218bp) protein (406aa)
Type II secretion system protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP73_DELAS rbh
Type IV pilus assembly protein PilC {ECO:0000313|EMBL:EZP54124.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
type II secretion system protein rbh
S1_scaffold_13_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30103..31845)
DNA (1743bp) protein (581aa)
Type IV-A pilus assembly ATPase PilB n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AWS9_DELSC rbh
Type IV-A pilus assembly ATPase PilB {ECO:0000313|EMBL:KFJ12108.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
type IV-A pilus assembly ATPase PilB rbh
S1_scaffold_13_curated_trna_8
unknown

Not on your lists

comp(31979..32052)
DNA (74bp)
transferRNA Pro
S1_scaffold_13_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32086..33066)
DNA (981bp) protein (327aa)
Polyprenyl synthetase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP71_DELAS rbh
polyprenyl synthetase rbh
Polyprenyl synthetase {ECO:0000313|EMBL:ABX38116.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_13_curated_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


33246..33557
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=4 Tax=Delftia RepID=RL21_DELAS
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
S1_scaffold_13_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


33573..33830
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=4 Tax=Delftia RepID=RL27_DELAS
50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
S1_scaffold_13_curated_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33980..35095
DNA (1116bp) protein (372aa)
GTPase Obg n=2 Tax=Delftia RepID=OBG_DELAS rbh
GTP-binding protein Obg/CgtA rbh
GTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000255|HAMAP-Rule:MF_01454}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Displaying items 1-30 of 237 in total

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