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S1_scaffold_23_curated

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Displaying items 1-30 of 222 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_23_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..370
DNA (369bp) protein (123aa)
Peptide chain release factor 2 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW87_DELAS
peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_23_curated_2
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

448..3174
DNA (2727bp) protein (909aa)
Aminopeptidase N n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AY85_DELSC rbh
aminopeptidase N rbh
Aminopeptidase N {ECO:0000313|EMBL:AEF90502.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_23_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3225..4232
DNA (1008bp) protein (336aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Fructose-1,6-bisphosphatase class 1 n=2 Tax=Delftia acidovorans RepID=F16PA_DELAS rbh
fructose-1,6-bisphosphatase rbh
S1_scaffold_23_curated_trna_1
unknown

Not on your lists

4259..4331
DNA (73bp)
transferRNA Thr
S1_scaffold_23_curated_4
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4595..4864)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WIH5_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH08862.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
S1_scaffold_23_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4861..5139)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XDR3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37969.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
S1_scaffold_23_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6300..7007)
DNA (708bp) protein (236aa)
Integrase catalytic region n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BWG3_DELAS rbh
integrase catalytic subunit rbh
Integrase catalytic region {ECO:0000313|EMBL:ABX36183.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_23_curated_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7774..7938
DNA (165bp) protein (55aa)
Transposase IS3/IS911 family protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKG0_VARPS
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ACS17258.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
S1_scaffold_23_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7935..8417
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL14 RepID=U8JKV0_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD45498.1}; Flags: Fragment;; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
transposase IS3/IS911 family protein rbh
S1_scaffold_23_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9209..9595
DNA (387bp) protein (129aa)
UPI0003D3D6EC related cluster n=1 Tax=unknown RepID=UPI0003D3D6EC
Putative lipoprotein {ECO:0000313|EMBL:KFJ11229.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
S1_scaffold_23_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10054..10287
DNA (234bp) protein (78aa)
UPI0003D3F7B8 related cluster n=1 Tax=unknown RepID=UPI0003D3F7B8
Putative lipoprotein {ECO:0000313|EMBL:KFJ11092.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_23_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10276..10542)
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:KFJ11655.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_23_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10861..11103
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375E9A
Uncharacterized protein {ECO:0000313|EMBL:KFJ11065.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_23_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11021..11782)
DNA (762bp) protein (254aa)
Integrase family protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW15_DELAS
Phage integrase family protein {ECO:0000313|EMBL:KFJ11205.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
integrase family protein
S1_scaffold_23_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11985..13223)
DNA (1239bp) protein (413aa)
Major facilitator superfamily MFS_1 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW14_DELAS rbh
major facilitator transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABX35830.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_23_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13942..14628
DNA (687bp) protein (229aa)
adenylylsulfate kinase (EC:2.7.1.25) rbh
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-Rule:MF_00065}; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00065}; Adenosine-5'-phosphosulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Adenylyl-sulfate kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW13_DELAS rbh
S1_scaffold_23_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14625..15260
DNA (636bp) protein (212aa)
Aspartyl/Asparaginyl beta-hydroxylase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW12_DELAS rbh
aspartyl/asparaginyl beta-hydroxylase rbh
Aspartyl/Asparaginyl beta-hydroxylase {ECO:0000313|EMBL:ABX35828.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_23_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15253..16413
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW11_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX35827.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_23_curated_18
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16859..17428)
DNA (570bp) protein (190aa)
Helix-turn-helix domain protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYA1_DELSC rbh
helix-turn-helix domain-containing protein rbh
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEF90518.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_23_curated_19
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17443..18345
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYA2_DELSC rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEF90519.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_23_curated_20
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18719..20779
DNA (2061bp) protein (687aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW08_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP52279.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein rbh
S1_scaffold_23_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20963..21694
DNA (732bp) protein (244aa)
Glutamine amidotransferase class-I n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW07_DELAS rbh
class I glutamine amidotransferase rbh
Glutamine amidotransferase class-I {ECO:0000313|EMBL:ABX35823.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_23_curated_22
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21805..22614
DNA (810bp) protein (270aa)
Transcriptional regulator, DeoR family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYA5_DELSC rbh
DeoR family transcriptional regulator rbh
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EZP52277.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_23_curated_23
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22649..23575
DNA (927bp) protein (309aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYA6_DELSC rbh
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EZP52276.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
periplasmic binding protein/LacI transcriptional regulator rbh
S1_scaffold_23_curated_24
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23596..25152
DNA (1557bp) protein (519aa)
monosaccharide-transporting ATPase (EC:3.6.3.17) rbh
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AEF90524.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEF90524.1};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
Monosaccharide-transporting ATPase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYA7_DELSC rbh
S1_scaffold_23_curated_25
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25149..26186
DNA (1038bp) protein (346aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYA8_DELSC rbh
Ribose transport system permease {ECO:0000313|EMBL:EZP52274.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
ABC transporter permease rbh
S1_scaffold_23_curated_26
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26247..27215
DNA (969bp) protein (323aa)
fructokinase (EC:2.7.1.4) rbh
Fructokinase {ECO:0000313|EMBL:AEF90526.1}; EC=2.7.1.4 {ECO:0000313|EMBL:AEF90526.1};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
Fructokinase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYA9_DELSC rbh
S1_scaffold_23_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27220..28572
DNA (1353bp) protein (451aa)
D-tagatose-bisphosphate aldolase non-catalytic subunit (EC:4.1.2.40) rbh
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit {ECO:0000313|EMBL:ABX35817.1}; EC=4.2.1.40 {ECO:0000313|EMBL:ABX35817.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW01_DELAS rbh
S1_scaffold_23_curated_28
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28669..28899
DNA (231bp) protein (77aa)
CopG-like domain-containing protein DNA-binding protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYB1_DELSC
CopG-like DNA-binding domain-containing protein
CopG-like domain-containing protein DNA-binding protein {ECO:0000313|EMBL:AEF90528.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_23_curated_29
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28909..29313
DNA (405bp) protein (135aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
Ribonuclease VapC n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYB2_DELSC
PilT protein domain-containing protein
Displaying items 1-30 of 222 in total

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