ggKbase home page

S1_scaffold_436_curated

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_436_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168..626
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C053_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX36315.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_436_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(765..2570)
DNA (1806bp) protein (602aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
NERD domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C052_DELAS rbh
NERD domain-containing protein rbh
S1_scaffold_436_curated_3
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3040..4590)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C051_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP49370.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein rbh
S1_scaffold_436_curated_4
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4751..5851)
DNA (1101bp) protein (367aa)
Porin n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AT25_DELSC rbh
Porin, gram-negative type {ECO:0000313|EMBL:EZP49369.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
porin rbh
S1_scaffold_436_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6443..8935
DNA (2493bp) protein (831aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C049_DELAS rbh
PAS/PAC sensor hybrid histidine kinase rbh
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ABX36311.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_436_curated_6
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9357..10088
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C048_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP54932.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein rbh
S1_scaffold_436_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10312..10605
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WUB2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43393.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
S1_scaffold_436_curated_8
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10586..11539)
DNA (954bp) protein (318aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C046_DELAS rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EZP54930.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
LysR family transcriptional regulator rbh
S1_scaffold_436_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11707..12870)
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C045_DELAS rbh
acyl-CoA dehydrogenase domain-containing protein rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABX36307.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_436_curated_10
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12928..13323)
DNA (396bp) protein (132aa)
Cupin 2 conserved barrel domain protein n=2 Tax=Delftia acidovorans RepID=A9C044_DELAS
cupin
Uncharacterized protein {ECO:0000313|EMBL:EZP54928.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_436_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13308..14627)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2W6J2_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD35273.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
L-carnitine dehydratase/bile acid-inducible protein F rbh
S1_scaffold_436_curated_12
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14639..15622)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C042_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP54926.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein rbh
S1_scaffold_436_curated_13
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15845..16297
DNA (453bp) protein (151aa)
Activator of Hsp90 ATPase 1 family protein n=2 Tax=Delftia acidovorans RepID=A9C041_DELAS rbh
activator of Hsp90 ATPase 1 family protein rbh
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:EZP54925.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_436_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16398..16733
DNA (336bp) protein (112aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C040_DELAS
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ABX36302.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_436_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16771..17550)
DNA (780bp) protein (260aa)
Putative lipoprotein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C039_DELAS rbh
putative lipoprotein rbh
Putative lipoprotein {ECO:0000313|EMBL:ABX36301.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_436_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17681..19210)
DNA (1530bp) protein (510aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C038_DELAS rbh
transcriptional regulator rbh
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ABX36300.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_436_curated_17
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19337..19972
DNA (636bp) protein (212aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C037_DELAS rbh
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:EZP54918.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
lysine exporter protein LysE/YggA rbh
S1_scaffold_436_curated_18
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20000..21064)
DNA (1065bp) protein (355aa)
tRNA 2-selenouridine synthase {ECO:0000256|SAAS:SAAS00035454}; EC=2.9.1.- {ECO:0000256|SAAS:SAAS00035457};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
tRNA 2-selenouridine synthase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AT40_DELSC rbh
tRNA 2-selenouridine synthase rbh
S1_scaffold_436_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21305..22429)
DNA (1125bp) protein (375aa)
Beta-lactamase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C035_DELAS rbh
Beta-lactamase family protein {ECO:0000313|EMBL:KFJ11035.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
beta-lactamase rbh
S1_scaffold_436_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22465..23172)
DNA (708bp) protein (236aa)
Aspartyl protease n=2 Tax=Delftia acidovorans RepID=S2WZJ7_DELAC rbh
Aspartyl protease {ECO:0000313|EMBL:EPD43380.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
aspartyl protease-like protein rbh
S1_scaffold_436_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23190..23960
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C033_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX36295.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_436_curated_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24230..26623
DNA (2394bp) protein (798aa)
Ig family protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C032_DELAS rbh
Ig family protein rbh
Ig family protein {ECO:0000313|EMBL:ABX36294.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_436_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26672..27934)
DNA (1263bp) protein (421aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
Isocitrate dehydrogenase [NADP] n=3 Tax=Delftia acidovorans RepID=A9C031_DELAS rbh
isocitrate dehydrogenase rbh
S1_scaffold_436_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28145..28366
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9C030_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFJ10926.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_436_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28582..29034
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AT46_DELSC
Uncharacterized protein {ECO:0000313|EMBL:KFJ09689.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
S1_scaffold_436_curated_26
Pseudomonas sp. Ag1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29561..30172
DNA (612bp) protein (204aa)
membrane protein n=1 Tax=Pseudomonas veronii RepID=UPI00034BEEDB rbh
TRAP transporter subunit DctM {ECO:0000313|EMBL:EJF71482.1}; TaxID=1197727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Ag1.;"
membrane protein
S1_scaffold_436_curated_27
Pseudomonas sp. RIT357, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30172..31080
DNA (909bp) protein (303aa)
aldose 1-epimerase n=1 Tax=Pseudomonas veronii RepID=UPI000349AD76 rbh
Putative epimerase {ECO:0000313|EMBL:EZP64456.1}; TaxID=1470593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT357.;"
putative epimerase rbh
Displaying 27 items

View Taxonomy