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S1_scaffold_118_curated

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_118_curated_1
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..212)
DNA (210bp) protein (70aa)
2-methylisocitrate dehydratase (EC:4.2.1.3)
2-methylisocitrate dehydratase, Fe/S-dependent n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ARY8_DELSC
Aconitate hydratase {ECO:0000313|EMBL:KEH14887.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
S1_scaffold_118_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(273..1460)
DNA (1188bp) protein (396aa)
methylcitrate synthase (EC:2.3.3.5) rbh
Citrate synthase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C127_DELAS rbh
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_118_curated_3
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1457..1855)
DNA (399bp) protein (133aa)
Thioesterase superfamily protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C128_DELAS
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:EZP55239.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_118_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1973..3385
DNA (1413bp) protein (471aa)
Transcriptional regulator, XRE family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ARY5_DELSC rbh
Helix-turn-helix family protein {ECO:0000313|EMBL:KFJ14335.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
XRE family transcriptional regulator rbh
S1_scaffold_118_curated_5
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3422..4387)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9C130_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP55237.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_118_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4695..5009
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C131_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX38494.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_118_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5092..5556
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C132_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX38495.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_118_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5587..5820
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C133_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX38496.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_118_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5828..6646
DNA (819bp) protein (273aa)
HAD family hydrolase (EC:3.1.3.12) rbh
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C134_DELAS rbh
S1_scaffold_118_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6643..8187
DNA (1545bp) protein (515aa)
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15) rbh
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000313|EMBL:ABX38498.1}; EC=2.4.1.15 {ECO:0000313|EMBL:ABX38498.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C135_DELAS rbh
S1_scaffold_118_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8296..9390
DNA (1095bp) protein (365aa)
Putative acyl-CoA dehydrogenase-related protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C136_DELAS rbh
putative acyl-CoA dehydrogenase-like protein rbh
Putative acyl-CoA dehydrogenase-related protein {ECO:0000313|EMBL:ABX38499.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_118_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9378..10136
DNA (759bp) protein (253aa)
LmbE family protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C137_DELAS rbh
LmbE family protein rbh
LmbE family protein {ECO:0000313|EMBL:ABX38500.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_118_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10133..10717
DNA (585bp) protein (195aa)
Methyltransferase type 12 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C138_DELAS rbh
type 12 methyltransferase rbh
Methyltransferase type 12 {ECO:0000313|EMBL:ABX38501.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_118_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10730..11518
DNA (789bp) protein (263aa)
Glycosyl transferase family 2 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C139_DELAS rbh
glycosyl transferase family protein rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:ABX38502.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_118_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11549..12040)
DNA (492bp) protein (164aa)
DinB family protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C140_DELAS rbh
DinB family protein rbh
DinB family protein {ECO:0000313|EMBL:ABX38503.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_118_curated_16
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12123..12980)
DNA (858bp) protein (286aa)
phenazine biosynthesis protein PhzF n=1 Tax=Chryseobacterium taeanense RepID=UPI000371F6F3 rbh
Phenazine biosynthesis protein PhzF {ECO:0000313|EMBL:KEH14878.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
phenazine biosynthesis protein PhzF family rbh
S1_scaffold_118_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13044..13448)
DNA (405bp) protein (135aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=2 Tax=Delftia RepID=A9C142_DELAS
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABX38505.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_118_curated_18
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13518..14885
DNA (1368bp) protein (456aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ARW5_DELSC rbh
GntR family transcriptional regulator rbh
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:AEF87751.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_118_curated_19
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14869..15309)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ARW4_DELSC
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF87750.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_118_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15315..16106)
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Delftia RepID=A9C145_DELAS rbh
short-chain dehydrogenase/reductase SDR rbh
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KFJ14264.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_118_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16113..16673)
DNA (561bp) protein (187aa)
Lipoprotein, putative n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C146_DELAS rbh
putative lipoprotein rbh
Lipoprotein, putative {ECO:0000313|EMBL:ABX38509.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_118_curated_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16670..18007)
DNA (1338bp) protein (446aa)
Sodium:galactoside symporter family protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C147_DELAS rbh
sodium:galactoside symporter family protein rbh
Sodium:galactoside symporter family protein {ECO:0000313|EMBL:ABX38510.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_118_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18026..18652)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C148_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX38511.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_118_curated_24
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18649..19917)
DNA (1269bp) protein (423aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79) rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AEF87745.1}; EC=2.1.1.79 {ECO:0000313|EMBL:AEF87745.1};; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ARV9_DELSC rbh
S1_scaffold_118_curated_25
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19914..20666)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ARV8_DELSC rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP48152.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_118_curated_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20663..22009)
DNA (1347bp) protein (449aa)
Amine oxidase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C151_DELAS rbh
amine oxidase rbh
Amine oxidase {ECO:0000313|EMBL:ABX38514.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_118_curated_27
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22150..22788
DNA (639bp) protein (213aa)
Transcriptional regulator, TetR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C152_DELAS rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EZP48150.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
TetR family transcriptional regulator rbh
S1_scaffold_118_curated_28
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22891..23415
DNA (525bp) protein (175aa)
RNA polymerase sigma-70 factor, ECF subfamily n=2 Tax=Delftia acidovorans RepID=S2WEW6_DELAC rbh
RNA polymerase sigma factor {ECO:0000313|EMBL:KEH14867.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
ECF subfamily RNA polymerase sigma-24 factor
S1_scaffold_118_curated_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23418..24371
DNA (954bp) protein (318aa)
Anti-FecI sigma factor, FecR n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C156_DELAS rbh
anti-FecI sigma factor FecR rbh
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ABX38519.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_118_curated_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24469..27006
DNA (2538bp) protein (846aa)
TonB-dependent siderophore receptor n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C157_DELAS rbh
TonB-dependent siderophore receptor rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ABX38520.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Displaying items 1-30 of 81 in total

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