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S1_scaffold_112_curated

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Displaying items 1-30 of 95 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_112_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..214
DNA (213bp) protein (71aa)
Transcriptional regulator, Fis family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYZ2_DELAS
Bacterial regulatory , Fis family protein {ECO:0000313|EMBL:KFJ11654.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
Fis family transcriptional regulator
S1_scaffold_112_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

391..999
DNA (609bp) protein (203aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYZ1_DELAS rbh
tripartite ATP-independent periplasmic transporter DctQ rbh
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ABX34886.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_112_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1017..2846
DNA (1830bp) protein (610aa)
TRAP dicarboxylate transporter, DctM subunit n=2 Tax=cellular organisms RepID=A9BYZ0_DELAS rbh
TRAP dicarboxylate transporter subunit DctM rbh
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ABX34885.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_112_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2993..4072)
DNA (1080bp) protein (360aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYY9_DELAS rbh
TRAP dicarboxylate transporter subunit DctP rbh
TRAP dicarboxylate transporter-DctP subunit {ECO:0000313|EMBL:ABX34884.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_112_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4357..5439)
DNA (1083bp) protein (361aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYY8_DELAS rbh
TRAP dicarboxylate transporter subunit DctP rbh
TRAP dicarboxylate transporter-DctP subunit {ECO:0000313|EMBL:ABX34883.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_112_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5687..7567)
DNA (1881bp) protein (627aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYY7_DELAS rbh
1-deoxy-D-xylulose-5-phosphate synthase rbh
S1_scaffold_112_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7607..8557)
DNA (951bp) protein (317aa)
Geranyltranstransferase (EC:2.5.1.10) rbh
Polyprenyl synthetase n=2 Tax=Delftia RepID=A9BYY6_DELAS rbh
Polyprenyl synthetase {ECO:0000313|EMBL:ABX34881.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_112_curated_8
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8566..8802)
DNA (237bp) protein (79aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYY5_DELAS
exonuclease VII small subunit
S1_scaffold_112_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9143..10282
DNA (1140bp) protein (380aa)
Rieske (2Fe-2S) domain protein n=2 Tax=Delftia RepID=A9BYY4_DELAS rbh
Rieske (2Fe-2S) domain-containing protein rbh
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ABX34879.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_112_curated_10
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10531..11511
DNA (981bp) protein (327aa)
Small multidrug resistance protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ALK1_DELSC rbh
Small multidrug resistance protein {ECO:0000313|EMBL:EZP50670.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
small multidrug resistance protein rbh
S1_scaffold_112_curated_11
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11605..12519
DNA (915bp) protein (305aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2) rbh
3-mercaptopyruvate sulfurtransferase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ALK2_DELSC rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_112_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12840..13166
DNA (327bp) protein (109aa)
Flagellar transcriptional regulator FlhD n=4 Tax=Delftia RepID=A9BYY1_DELAS
flagellar transcriptional activator
Flagellar transcriptional regulator FlhD {ECO:0000256|HAMAP-Rule:MF_00725, ECO:0000256|SAAS:SAAS00011626}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_112_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13194..13736
DNA (543bp) protein (181aa)
Flagellar transcriptional regulator FlhC n=2 Tax=Delftia RepID=A9BYY0_DELAS rbh
transcriptional activator FlhC rbh
Flagellar transcriptional regulator FlhC {ECO:0000256|HAMAP-Rule:MF_01891, ECO:0000256|PIRNR:PIRNR003159}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_112_curated_14
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13788..15896)
DNA (2109bp) protein (703aa)
EAL domain protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ALK5_DELSC rbh
EAL domain protein {ECO:0000313|EMBL:EZP50666.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
EAL domain-containing protein rbh
S1_scaffold_112_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15999..18848)
DNA (2850bp) protein (950aa)
phosphoenolpyruvate carboxylase (EC:4.1.1.31) rbh
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Phosphoenolpyruvate carboxylase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYX8_DELAS rbh
S1_scaffold_112_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18961..19899
DNA (939bp) protein (313aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61) rbh
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Porphobilinogen deaminase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYX7_DELAS rbh
S1_scaffold_112_curated_17
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19913..20722
DNA (810bp) protein (270aa)
Uroporphyrinogen III synthase HEM4 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYX6_DELAS rbh
uroporphyrinogen III synthase HEM4 rbh
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EZP50663.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_112_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20719..21861
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYX5_DELAS rbh
hypothetical protein rbh
HemX family protein {ECO:0000313|EMBL:KFJ09557.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_112_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21881..23188
DNA (1308bp) protein (436aa)
HemY domain protein n=2 Tax=Delftia RepID=A9BYX4_DELAS rbh
HemY domain-containing protein rbh
HemY domain protein {ECO:0000313|EMBL:ABX34869.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_112_curated_20
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23399..23992
DNA (594bp) protein (198aa)
Cytochrome B561 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYX3_DELAS rbh
Cytochrome b561 {ECO:0000313|EMBL:EZP50660.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
cytochrome B561 rbh
S1_scaffold_112_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24085..24657
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WRY6_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD37137.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein rbh
S1_scaffold_112_curated_22
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24727..25305
DNA (579bp) protein (193aa)
YceI family protein n=2 Tax=Delftia RepID=A9BYX1_DELAS rbh
hypothetical protein rbh
YceI family protein {ECO:0000313|EMBL:EZP50658.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_112_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25370..26875)
DNA (1506bp) protein (502aa)
GntR family transcriptional regulator/MocR family aminotransferase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WQN3_DELAC rbh
GntR family transcriptional regulator/MocR family aminotransferase {ECO:0000313|EMBL:EPD42088.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
transcriptional regulator rbh
S1_scaffold_112_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26976..27605
DNA (630bp) protein (210aa)
Transcriptional regulator n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XRH3_DELAC rbh
Transcriptional regulator {ECO:0000313|EMBL:EPD42089.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
FMN-binding negative transcriptional regulator rbh
S1_scaffold_112_curated_25
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27640..27987
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ALL7_DELSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP50654.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_112_curated_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28008..28415
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYW6_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX34861.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_112_curated_27
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28500..28784)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ALL9_DELSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEH09460.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
S1_scaffold_112_curated_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28804..29052)
DNA (249bp) protein (83aa)
Uncharacterized protein n=3 Tax=Delftia RepID=A9BYW4_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFJ11185.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_112_curated_29
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29090..29983)
DNA (894bp) protein (298aa)
Cation diffusion facilitator family transporter n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ALM1_DELSC rbh
cation diffusion facilitator family transporter rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AEF91449.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_112_curated_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30230..30859
DNA (630bp) protein (210aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=4 Tax=Delftia RepID=A9BYW2_DELAS rbh
glyoxalase/bleomycin resistance protein/dioxygenase rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD37145.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Displaying items 1-30 of 95 in total

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