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S1_scaffold_444_curated

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_444_curated_1
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1140)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM17 RepID=J2NJ93_9PSED rbh
Biofilm formation protein PelB {ECO:0000313|EMBL:BAQ80967.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
hypothetical protein rbh
S1_scaffold_444_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1301..2281
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2W6S9_DELAC rbh
Tripartite tricarboxylate transporter receptor family protein {ECO:0000313|EMBL:KFJ09997.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein rbh
S1_scaffold_444_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2309..4693
DNA (2385bp) protein (795aa)
Ferredoxin n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BRH2_DELAS rbh
Ferredoxin {ECO:0000313|EMBL:ABX33333.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
ferredoxin rbh
S1_scaffold_444_curated_4
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5096..5647
DNA (552bp) protein (184aa)
GCN5-related N-acetyltransferase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BRH1_DELAS rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EZP58098.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
N-acetyltransferase GCN5 rbh
S1_scaffold_444_curated_5
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5660..5977)
DNA (318bp) protein (106aa)
Small multidrug resistance protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BRH0_DELAS
small multidrug resistance protein
Quaternary ammonium compound-resistance protein SugE {ECO:0000313|EMBL:EZP58094.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_444_curated_6
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6169..6657)
DNA (489bp) protein (163aa)
PilT protein domain protein n=2 Tax=Delftia RepID=A9BRG9_DELAS rbh
hypothetical protein rbh
PilT protein domain protein {ECO:0000313|EMBL:EZP58093.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_444_curated_7
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6654..7934)
DNA (1281bp) protein (427aa)
Putative RNA methylase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BRG8_DELAS rbh
putative RNA methylase rbh
Putative RNA methylase {ECO:0000313|EMBL:EZP58092.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_444_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8050..9123
DNA (1074bp) protein (358aa)
ornithine cyclodeaminase (EC:4.3.1.12) rbh
Ornithine cyclodeaminase {ECO:0000313|EMBL:ABX33328.1}; EC=4.3.1.12 {ECO:0000313|EMBL:ABX33328.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Ornithine cyclodeaminase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BRG7_DELAS rbh
S1_scaffold_444_curated_9
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9141..10106
DNA (966bp) protein (322aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
Arginase n=2 Tax=cellular organisms RepID=A9BRG6_DELAS rbh
arginase rbh
S1_scaffold_444_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10113..11171)
DNA (1059bp) protein (353aa)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000256|HAMAP-Rule:MF_00200};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
RNA 3'-phosphate cyclase (EC:6.5.1.4) rbh
RNA 3'-phosphate cyclase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APY6_DELSC rbh
S1_scaffold_444_curated_11
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11181..11996)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X2T0_DELAC rbh
Nucleotidyltransferase-like protein {ECO:0000313|EMBL:EZP58088.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
nucleotidyltransferase rbh
S1_scaffold_444_curated_12
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12155..13372)
DNA (1218bp) protein (406aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
RNA-splicing ligase RtcB n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2W6S0_DELAC rbh
hypothetical protein rbh
S1_scaffold_444_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13432..13929)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X2A5_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD34129.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
S1_scaffold_444_curated_14
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13986..15125)
DNA (1140bp) protein (380aa)
Band 7 protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BRG1_DELAS rbh
hypothetical protein rbh
Band 7 protein {ECO:0000313|EMBL:EZP58085.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_444_curated_trna_1
unknown

Not on your lists

comp(15410..15480)
DNA (71bp)
transferRNA Pseudo
S1_scaffold_444_curated_15
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15824..17431
DNA (1608bp) protein (536aa)
Sigma 54 interacting domain protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APZ1_DELSC rbh
Transcriptional regulatory protein RtcR {ECO:0000313|EMBL:EZP58084.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
sigma 54 interacting domain-containing protein rbh
S1_scaffold_444_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17470..19086)
DNA (1617bp) protein (539aa)
RNA polymerase sigma-54 factor n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BRF9_DELAS rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
RNA polymerase sigma 54 subunit RpoN rbh
S1_scaffold_444_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19141..19929)
DNA (789bp) protein (263aa)
sulfate-transporting ATPase (EC:3.6.3.25) rbh
ABC transporter related n=2 Tax=Delftia RepID=A9BRF8_DELAS rbh
ABC transporter family protein {ECO:0000313|EMBL:KFJ09614.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_444_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19926..20588)
DNA (663bp) protein (221aa)
Lipopolysaccharide transport periplasmic protein LptA n=2 Tax=Delftia RepID=A9BRF7_DELAS rbh
lipopolysaccharide transport periplasmic protein LptA rbh
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_444_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20760..21410)
DNA (651bp) protein (217aa)
Thiol:disulfide interchange protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BRF6_DELAS rbh
DSBA oxidoreductase rbh
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_444_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21492..22181)
DNA (690bp) protein (230aa)
Sporulation domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BRF5_DELAS rbh
sporulation domain-containing protein rbh
Sporulation related domain protein {ECO:0000313|EMBL:KFJ10628.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_444_curated_21
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22202..23899)
DNA (1698bp) protein (566aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19) rbh
Arginine--tRNA ligase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=SYR_DELAS rbh
S1_scaffold_444_curated_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23954..24400)
DNA (447bp) protein (149aa)
Putative transmembrane protein n=2 Tax=Delftia RepID=A9BRF3_DELAS
hypothetical protein
Putative transmembrane protein {ECO:0000313|EMBL:ABX33314.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_444_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24508..25113)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQT2_DELSC rbh
Uncharacterized protein {ECO:0000313|EMBL:KFJ11303.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein rbh
S1_scaffold_444_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25142..26077)
DNA (936bp) protein (312aa)
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABX33312.1}; EC=4.2.1.1 {ECO:0000313|EMBL:ABX33312.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Transcriptional regulator, LysR family n=2 Tax=Delftia RepID=A9BRF1_DELAS rbh
LysR family transcriptional regulator rbh
S1_scaffold_444_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26382..28574
DNA (2193bp) protein (731aa)
Malate synthase G {ECO:0000255|HAMAP-Rule:MF_00641}; EC=2.3.3.9 {ECO:0000255|HAMAP-Rule:MF_00641};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
malate synthase G (EC:2.3.3.9) rbh
Malate synthase G n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=MASZ_DELAS rbh
S1_scaffold_444_curated_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28655..28909
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Delftia RepID=S2W4I6_DELAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD34116.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
S1_scaffold_444_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28927..29115
DNA (189bp) protein (63aa)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
4-oxalocrotonate tautomerase family enzyme n=4 Tax=Delftia RepID=A9BRE8_DELAS
4-oxalocrotonate tautomerase family protein
S1_scaffold_444_curated_28
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29179..29847)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQT7_DELSC rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP45176.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein rbh
S1_scaffold_444_curated_29
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29887..30714
DNA (828bp) protein (276aa)
Glutamine amidotransferase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2W7W6_DELAC rbh
Glutamine amidotransferase {ECO:0000313|EMBL:EZP45177.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
class II glutamine amidotransferase rbh
Displaying 30 items

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