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S1_scaffold_254_curated

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Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_254_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1883
DNA (1881bp) protein (627aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1A6_DELAS
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ABX38569.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
S1_scaffold_254_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1963..3465
DNA (1503bp) protein (501aa)
Sodium/proline symporter n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1A7_DELAS rbh
sodium/proline symporter rbh
Sodium/proline symporter {ECO:0000313|EMBL:ABX38570.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_254_curated_3
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3762..4748
DNA (987bp) protein (329aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AR23_DELSC rbh
TRAP dicarboxylate transporter subunit DctP rbh
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:AEF87688.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_254_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4896..5411
DNA (516bp) protein (172aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=3 Tax=Delftia RepID=F6AR22_DELSC rbh
tripartite AtP-independent periplasmic transporter subunit DctQ rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD35024.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
S1_scaffold_254_curated_5
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5431..6717
DNA (1287bp) protein (429aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AR21_DELSC rbh
TRAP dicarboxylate transporter subunit DctM rbh
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:EZP57883.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_254_curated_6
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6937..7737)
DNA (801bp) protein (267aa)
Transcriptional regulator, IclR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1B1_DELAS rbh
IclR family transcriptional regulator rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EZP57884.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_254_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7898..9550
DNA (1653bp) protein (551aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1B2_DELAS rbh
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ABX38575.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
glucose-methanol-choline oxidoreductase rbh
S1_scaffold_254_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9599..10927
DNA (1329bp) protein (443aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W9Z7_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD35020.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
general substrate transporter rbh
S1_scaffold_254_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11108..11968
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1B4_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX38577.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_254_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11991..12956)
DNA (966bp) protein (322aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AR16_DELSC rbh
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KFJ14318.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
LysR family transcriptional regulator rbh
S1_scaffold_254_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13086..14264
DNA (1179bp) protein (393aa)
Major facilitator superfamily MFS_1 n=2 Tax=Delftia RepID=A9C1B6_DELAS rbh
major facilitator superfamily protein rbh
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KFJ13973.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_254_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14268..20225)
DNA (5958bp) protein (1986aa)
Excinuclease ABC, A subunit n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AR14_DELSC rbh
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
excinuclease ABC subunit A rbh
S1_scaffold_254_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20404..20523)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1B8_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX38581.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_254_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20661..21644)
DNA (984bp) protein (328aa)
Porin, gram-negative type n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1B9_DELAS rbh
porin rbh
Porin, gram-negative type {ECO:0000313|EMBL:ABX38582.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_254_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22041..23723)
DNA (1683bp) protein (561aa)
General substrate transporter n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1C0_DELAS rbh
General substrate transporter {ECO:0000313|EMBL:ABX38583.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
general substrate transporter rbh
S1_scaffold_254_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24027..24335
DNA (309bp) protein (103aa)
Uncharacterized protein n=3 Tax=Delftia acidovorans RepID=A9C1C1_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX38584.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_254_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24332..26065
DNA (1734bp) protein (578aa)
SSS sodium solute transporter superfamily n=2 Tax=Delftia RepID=A9C1C2_DELAS rbh
Transporter, solute:sodium symporter family protein {ECO:0000313|EMBL:KFJ14177.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SSS family solute/sodium (Na+) symporter rbh
S1_scaffold_254_curated_18
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26291..26926
DNA (636bp) protein (212aa)
PEBP family protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1C3_DELAS rbh
PEBP family protein rbh
YbhB/YbcL family Raf kinase inhibitor-like protein {ECO:0000313|EMBL:EZP57896.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_254_curated_19
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26948..27601)
DNA (654bp) protein (218aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AR07_DELSC rbh
Exonuclease RNase T and DNA polymerase III rbh
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:AEF87672.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_254_curated_20
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27598..29451)
DNA (1854bp) protein (618aa)
Putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AR06_DELSC rbh
CBS domain-containing protein {ECO:0000313|EMBL:EZP57898.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase rbh
S1_scaffold_254_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29452..30087)
DNA (636bp) protein (212aa)
DSBA oxidoreductase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AR05_DELSC rbh
DSBA-like thioredoxin domain protein {ECO:0000313|EMBL:KFJ14282.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
DSBA oxidoreductase rbh
S1_scaffold_254_curated_22
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30111..30356)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9C1C7_DELAS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF87669.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_254_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30353..30856)
DNA (504bp) protein (168aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AR03_DELSC rbh
YbaK/prolyl-tRNA synthetase associated domain-containing protein rbh
Aminoacyl-tRNA editing domain protein {ECO:0000313|EMBL:KFJ14135.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_254_curated_24
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30859..31800)
DNA (942bp) protein (314aa)
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4) rbh
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XQJ2_DELAC rbh
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:EZP57902.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_254_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31910..32818)
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=4 Tax=Delftia RepID=A9C1D0_DELAS rbh
LysR family transcriptional regulator rbh
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KFJ14261.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_254_curated_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32910..33872
DNA (963bp) protein (321aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35) rbh
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W6X5_DELAC rbh
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein {ECO:0000313|EMBL:KFJ14260.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_254_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33869..34750
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQZ9_DELSC rbh
Uncharacterized protein {ECO:0000313|EMBL:KFJ14472.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein rbh
S1_scaffold_254_curated_28
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34867..35901
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1D3_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP57906.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein rbh
S1_scaffold_254_curated_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35911..36831)
DNA (921bp) protein (307aa)
Glyoxylate/hydroxypyruvate reductase A {ECO:0000313|EMBL:KFJ14418.1}; EC=1.1.1.81 {ECO:0000313|EMBL:KFJ14418.1};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hydroxypyruvate reductase (EC:1.1.1.81) rbh
Hydroxypyruvate reductase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQZ7_DELSC rbh
S1_scaffold_254_curated_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36902..38920)
DNA (2019bp) protein (673aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4) rbh
Carbamoyl-phosphate synthase L chain ATP-binding n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1D5_DELAS rbh
Carbamoyl-phosphate synthase L chain ATP-binding {ECO:0000313|EMBL:ABX38598.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Displaying items 1-30 of 41 in total

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