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S1_scaffold_516_curated

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_516_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..499)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XX89_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD44159.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
luciferase family protein
S1_scaffold_516_curated_2
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(480..2171)
DNA (1692bp) protein (564aa)
nickel-transporting ATPase (EC:3.6.3.30 3.6.3.24) rbh
Nickel-transporting ATPase., Fe(3+)-transporting ATPase {ECO:0000313|EMBL:AEF92437.1}; EC=3.6.3.24 {ECO:0000313|EMBL:AEF92437.1};; EC=3.6.3.30 {ECO:0000313|EMBL:AEF92437.1};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
Nickel-transporting ATPase., Fe(3+)-transporting ATPase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B184_DELSC rbh
S1_scaffold_516_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2168..3118)
DNA (951bp) protein (317aa)
Peptide/nickel transport system permease n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WMQ6_DELAC rbh
Peptide/nickel transport system permease {ECO:0000313|EMBL:EPD33967.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ABC transporter permease rbh
S1_scaffold_516_curated_4
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3115..4062)
DNA (948bp) protein (316aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BS87_DELAS rbh
binding-protein-dependent transport system inner membrane protein rbh
Peptide/nickel transport system permease {ECO:0000313|EMBL:EZP57782.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_516_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4091..5764)
DNA (1674bp) protein (558aa)
ABC transporter substrate binding protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X1W8_DELAC rbh
ABC transporter substrate binding protein {ECO:0000313|EMBL:EPD44155.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
extracellular solute-binding protein rbh
S1_scaffold_516_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6017..6568
DNA (552bp) protein (184aa)
OsmC family protein n=3 Tax=Delftia RepID=A9BS89_DELAS rbh
OsmC family protein rbh
OsmC-like family protein {ECO:0000313|EMBL:KFJ11271.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_516_curated_7
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6594..7433
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B179_DELSC rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEF92432.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_516_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7475..8806
DNA (1332bp) protein (444aa)
Molecular chaperone, HSP70 class n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BS91_DELAS rbh
molecular chaperone, HSP70 class rbh
Molecular chaperone, HSP70 class {ECO:0000313|EMBL:ABX33705.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_516_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8932..9792)
DNA (861bp) protein (287aa)
16S rRNA (-2'-O)-methyltransferase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W452_DELAC rbh
16S rRNA (-2'-O)-methyltransferase {ECO:0000313|EMBL:EPD33961.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
uroporphyrin-III C/tetrapyrrole methyltransferase rbh
S1_scaffold_516_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9873..10289
DNA (417bp) protein (139aa)
UPF0102 protein DelCs14_5459 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B176_DELSC
hypothetical protein
UPF0102 protein DR66_433 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_516_curated_11
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10363..10971
DNA (609bp) protein (203aa)
Phosphoheptose isomerase n=2 Tax=Delftia RepID=A9BS94_DELAS rbh
phosphoheptose isomerase rbh
D-sedoheptulose 7-phosphate isomerase {ECO:0000313|EMBL:EZP57775.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_516_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10968..11699
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WWK4_DELAC rbh
BON domain protein {ECO:0000313|EMBL:KFJ10412.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
transport-associated protein rbh
S1_scaffold_516_curated_13
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11899..12810)
DNA (912bp) protein (304aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60) rbh
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:AEF92426.1}; EC=1.1.1.60 {ECO:0000313|EMBL:AEF92426.1};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
2-hydroxy-3-oxopropionate reductase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B173_DELSC rbh
S1_scaffold_516_curated_14
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12936..14072)
DNA (1137bp) protein (379aa)
Twitching motility protein n=2 Tax=Delftia RepID=A9BS97_DELAS rbh
twitching motility protein rbh
Twitching motility protein {ECO:0000313|EMBL:AEF92425.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_516_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14190..14822)
DNA (633bp) protein (211aa)
Cyclic nucleotide-binding protein n=2 Tax=Delftia RepID=A9BS98_DELAS rbh
putative Crp/Fnr family transcriptional regulator rbh
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:KFJ09413.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_516_curated_16
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14854..15897)
DNA (1044bp) protein (348aa)
Twitching motility protein n=2 Tax=Delftia RepID=A9BS99_DELAS rbh
twitching motility protein rbh
Twitching mobility protein {ECO:0000313|EMBL:EZP57770.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_516_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15935..16660
DNA (726bp) protein (242aa)
Alanine racemase domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BSA0_DELAS rbh
alanine racemase domain-containing protein rbh
Alanine racemase domain protein {ECO:0000313|EMBL:ABX33714.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_516_curated_18
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16699..17964)
DNA (1266bp) protein (422aa)
Extracellular ligand-binding receptor n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B168_DELSC rbh
extracellular ligand-binding receptor rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AEF92421.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_516_curated_19
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17991..18713)
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WQJ7_DELAC rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EZP57767.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
TetR family transcriptional regulator rbh
S1_scaffold_516_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18873..20471
DNA (1599bp) protein (533aa)
AMP-dependent synthetase and ligase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BSA3_DELAS rbh
AMP-dependent synthetase/ligase rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABX33717.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_516_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20618..23911
DNA (3294bp) protein (1098aa)
Carbamoyl-phosphate synthase L chain ATP-binding n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BSA4_DELAS rbh
carbamoyl-phosphate synthase subunit L rbh
Carbamoyl-phosphate synthase L chain ATP-binding {ECO:0000313|EMBL:ABX33718.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_516_curated_22
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24012..25154
DNA (1143bp) protein (381aa)
Aminotransferase class V n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B164_DELSC rbh
class V aminotransferase rbh
Aminotransferase class V {ECO:0000313|EMBL:EZP57764.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_516_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25188..25607
DNA (420bp) protein (140aa)
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BSA6_DELAS
S1_scaffold_516_curated_24
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25696..26616
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B162_DELSC rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP57762.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S1_scaffold_516_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26600..27607)
DNA (1008bp) protein (336aa)
Transcriptional regulator, NifA subfamily, Fis Family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B161_DELSC rbh
AAA domain family protein {ECO:0000313|EMBL:KFJ10431.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
NifA subfamily transcriptional regulator rbh
Displaying 25 items

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