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S10_scaffold_639_curated

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_639_curated_1
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(514..1017)
DNA (504bp) protein (168aa)
Two-component response regulator n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G278_9BRAD
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:BAL74865.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
S10_scaffold_639_curated_2
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1111..1530)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6BJ01_PSERE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN49179.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
S10_scaffold_639_curated_3
unknown

Not on your lists

comp(1527..1619)
DNA (93bp) protein (31aa)

This feature has no annotations

S10_scaffold_639_curated_4
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1706..2278
DNA (573bp) protein (191aa)
Transcriptional regulator, TetR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9Q5_NOVAD
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABD25418.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S10_scaffold_639_curated_5
unknown

Not on your lists

2402..2536
DNA (135bp) protein (45aa)

This feature has no annotations

S10_scaffold_639_curated_6
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2737..2991
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Sphingomonas wittichii RepID=A5VD67_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE46507.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
S10_scaffold_639_curated_7
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2988..3416
DNA (429bp) protein (143aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Ribonuclease VapC n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKN5_9RHIZ
PilT domain-containing protein
S10_scaffold_639_curated_8
unknown

Not on your lists

comp(3562..4323)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036DB36F
S10_scaffold_639_curated_9
unknown

Not on your lists

comp(4320..4835)
DNA (516bp) protein (172aa)

This feature has no annotations

S10_scaffold_639_curated_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5069..6022
DNA (954bp) protein (318aa)
antirepressor n=1 Tax=Sphingobium chinhatense RepID=UPI00038081B0 rbh
Antirestriction protein {ECO:0000313|EMBL:CDN95776.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
Antirestriction protein; ArdC rbh
S10_scaffold_639_curated_11
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6214..8343
DNA (2130bp) protein (710aa)
ParB-like protein n=3 Tax=Sphingobium RepID=D4Z979_SPHJU rbh
ParB domain-containing protein nuclease {ECO:0000313|EMBL:KFC64492.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
ParB-like protein rbh
S10_scaffold_639_curated_12
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8448..8924
DNA (477bp) protein (159aa)
UPI0003CE6880 related cluster n=1 Tax=unknown RepID=UPI0003CE6880
Uncharacterized protein {ECO:0000313|EMBL:CDN95773.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
S10_scaffold_639_curated_13
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9436..9603
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PJ28_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDN94507.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
S10_scaffold_639_curated_14
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9878..12466
DNA (2589bp) protein (863aa)
Methylase/helicase n=1 Tax=Nitratireductor indicus C115 RepID=K2P1B6_9RHIZ rbh
Methylase/helicase {ECO:0000313|EMBL:KFC64488.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
methylase/helicase rbh
S10_scaffold_639_curated_15
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12414..14135
DNA (1722bp) protein (574aa)
UPI0003D6336C related cluster n=1 Tax=unknown RepID=UPI0003D6336C
Methylase/helicase {ECO:0000313|EMBL:KFC64488.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
methylase/helicase
S10_scaffold_639_curated_16
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14136..15173
DNA (1038bp) protein (346aa)
DNA primase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000313A906 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC64487.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein rbh
S10_scaffold_639_curated_17
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15482..16561
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHL7_BREDI rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC64486.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein rbh
S10_scaffold_639_curated_18
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16616..17032
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FB75
Uncharacterized protein {ECO:0000313|EMBL:KFC64485.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
S10_scaffold_639_curated_19
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17236..17715
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI0002DA21C7
Uncharacterized protein {ECO:0000313|EMBL:EXL02171.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hypothetical protein
S10_scaffold_639_curated_20
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17972..18409
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8B4G9_RHIRD
putative uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:KGM52080.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
S10_scaffold_639_curated_21
unknown

Not on your lists

comp(18224..18844)
DNA (621bp) protein (207aa)

This feature has no annotations

S10_scaffold_639_curated_22
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19319..19717
DNA (399bp) protein (133aa)
Single-stranded DNA-binding protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2M0_SPHJU
ssb; single-stranded DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
S10_scaffold_639_curated_23
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19958..20173
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FU8_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG63727.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
S10_scaffold_639_curated_24
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20268..20741
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00035D52D8
Uncharacterized protein {ECO:0000313|EMBL:KHJ54571.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
hypothetical protein
S10_scaffold_639_curated_25
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20895..21164
DNA (270bp) protein (90aa)
transcriptional regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031FAD2A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG63725.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
S10_scaffold_639_curated_26
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21165..22244
DNA (1080bp) protein (360aa)
Replication initiator protein A n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UN96_9SPHN rbh
Replication initiator protein A {ECO:0000313|EMBL:ENY79930.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
replication initiator protein A rbh
S10_scaffold_639_curated_27
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22241..22894
DNA (654bp) protein (218aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFF9_RHIRD rbh
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:EGP54464.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
ParA-like protein rbh
S10_scaffold_639_curated_28
Hyphomonas sp. T16B2, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22891..23145
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003160CD7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KCZ50375.1}; TaxID=1280941 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. T16B2.;"
S10_scaffold_639_curated_29
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23142..23660
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BD364 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE54113.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
S10_scaffold_639_curated_30
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23657..24202
DNA (546bp) protein (182aa)
Type IV secretory pathway, protease TraF n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3ATV9_9CAUL rbh
Peptidase S26 {ECO:0000313|EMBL:KHJ54576.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
TraF peptidase. serine peptidase MEROPS family S26C
Displaying items 1-30 of 49 in total

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