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S10_scaffold_1182_curated

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_1182_curated_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..716
DNA (714bp) protein (238aa)
Branched-chain amino acid ABC transporter periplasmic protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT68_9RHIZ rbh
Branched-chain amino acid ABC transporter periplasmic protein {ECO:0000313|EMBL:EHK56067.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
S10_scaffold_1182_curated_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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755..1618
DNA (864bp) protein (288aa)
Branched-chain amino acid ABC transport system permease n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT67_9RHIZ rbh
Branched-chain amino acid ABC transport system permease {ECO:0000313|EMBL:EHK56066.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
livH; branched-chain amino acid ABC transporter permease rbh
S10_scaffold_1182_curated_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1629..2624
DNA (996bp) protein (332aa)
ABC transporter permease n=1 Tax=Herbaspirillum seropedicae RepID=UPI00031715FE rbh
inner-membrane translocator rbh
Tax=RBG_16_Betaproteobacteria_64_18_curated
S10_scaffold_1182_curated_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2624..3376
DNA (753bp) protein (251aa)
livG; leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily (EC:3.6.3.31)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT64_9RHIZ rbh
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EHK56110.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S10_scaffold_1182_curated_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3373..4095
DNA (723bp) protein (241aa)
ABC transporter-like protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT63_9RHIZ rbh
ABC transporter-like protein {ECO:0000313|EMBL:EHK56109.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter-like protein
S10_scaffold_1182_curated_6
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4176..4910
DNA (735bp) protein (245aa)
Transcriptional regulator GntR family n=1 Tax=Rhizobium sp. RepID=L0NFS4_RHISP rbh
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCF19729.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
vanR; Transcriptional regulator VanR
S10_scaffold_1182_curated_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5065..5349
DNA (285bp) protein (95aa)
XRE family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUN0_9RHIZ
XRE family transcriptional regulator {ECO:0000313|EMBL:EHK55576.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
XRE family transcriptional regulator
S10_scaffold_1182_curated_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5346..7361
DNA (2016bp) protein (672aa)
hyfB; hydrogenase 4 subunit B (EC:1.-.-.-) rbh
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0VDI3_RHILV rbh
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit {ECO:0000313|EMBL:EJC71366.1}; Flags: Precursor;; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
S10_scaffold_1182_curated_9
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7352..8308
DNA (957bp) protein (319aa)
UPI0003CE337D related cluster n=1 Tax=unknown RepID=UPI0003CE337D rbh
Formate hydrogenlyase {ECO:0000313|EMBL:ESW90120.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
putative hydrogenase protein rbh
S10_scaffold_1182_curated_10
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8311..8973
DNA (663bp) protein (221aa)
Putative hydrogenase-4 component E n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6H7_9RHIZ rbh
Hydrogenase-4 component E {ECO:0000313|EMBL:KGD96378.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein rbh
S10_scaffold_1182_curated_11
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8970..10421
DNA (1452bp) protein (484aa)
hyfF; hydrogenase 4 subunit F (EC:1.-.-.-) rbh
oxidoreductase n=1 Tax=Rhizobium leguminosarum RepID=UPI000375B5CA rbh
Hydrogenase 4 subunit F {ECO:0000313|EMBL:KGD96377.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
S10_scaffold_1182_curated_12
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10431..11957
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000364465D rbh
Hydrogenase expression protein HypE {ECO:0000313|EMBL:ESY77418.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
NADH-ubiquinone oxidoreductase chain 49kDa rbh
S10_scaffold_1182_curated_13
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11967..12488
DNA (522bp) protein (174aa)
HycG protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89GK1_BRADU
hycG; hydrogenase-3 subunit G
HycG protein {ECO:0000313|EMBL:BAC51609.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
S10_scaffold_1182_curated_14
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12616..14037
DNA (1422bp) protein (474aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
6-phosphogluconate dehydrogenase (EC:1.1.1.44) rbh
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKM5_9RHIZ rbh
S10_scaffold_1182_curated_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14041..15123)
DNA (1083bp) protein (361aa)
Transcription regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKM4_9RHIZ rbh
Transcription regulator {ECO:0000313|EMBL:EHK58722.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator rbh
S10_scaffold_1182_curated_16
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15530..16765
DNA (1236bp) protein (412aa)
ABC transporter substrate-binding protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EMT5_9RHOB rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESW61477.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
sugar ABC transporter substrate-binding protein rbh
S10_scaffold_1182_curated_17
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16725..17630
DNA (906bp) protein (302aa)
ABC transporter, membrane spanning protein (Sugar) n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CVI0_9RHIZ rbh
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EDQ35379.2}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
sugar ABC transporter permease rbh
S10_scaffold_1182_curated_18
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17623..18576
DNA (954bp) protein (318aa)
Putative transport system permease abc transporter protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CVI3_9RHIZ rbh
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EDQ35380.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
binding-protein-dependent transport systems inner membrane component rbh
S10_scaffold_1182_curated_19
Mesorhizobium sp. L103C105A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18582..19682
DNA (1101bp) protein (367aa)
UPI0003CFC2BF related cluster n=1 Tax=unknown RepID=UPI0003CFC2BF rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESZ72490.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C105A0.;"
sugar ABC transporter ATP-binding protein rbh
S10_scaffold_1182_curated_20
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19785..22247
DNA (2463bp) protein (821aa)
manA; beta-mannosidase (EC:3.2.1.25) rbh
Beta-mannosidase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EHT1_9RHOB rbh
Beta-mannosidase {ECO:0000313|EMBL:ESW59540.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
S10_scaffold_1182_curated_21
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22265..23011
DNA (747bp) protein (249aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HPV6_9RHIZ rbh
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:EJN02206.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
xylose isomerase domain-containing protein rbh
S10_scaffold_1182_curated_22
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23023..23238
DNA (216bp) protein (72aa)
oxidoreductase n=1 Tax=Rhizobium loti RepID=UPI00036401C4
oxidoreductase domain-containing protein
Oxidoreductase {ECO:0000313|EMBL:ESY77742.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
Displaying 22 items

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