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S10_scaffold_496_curated

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Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_496_curated_1
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1685
DNA (1683bp) protein (561aa)
UPI0003CEF8B9 related cluster n=1 Tax=unknown RepID=UPI0003CEF8B9 rbh
Type VI secretion protein {ECO:0000313|EMBL:ESY37241.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
type VI secretion protein icmf rbh
S10_scaffold_496_curated_2
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1714..2571
DNA (858bp) protein (286aa)
Putative phosphoprotein phosphatase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F687_9RHIZ rbh
Putative phosphoprotein phosphatase {ECO:0000313|EMBL:CCV11970.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
phosphoprotein phosphatase rbh
S10_scaffold_496_curated_3
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2568..5180
DNA (2613bp) protein (871aa)
Serine/threonine kinase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EPE0_9RHIZ rbh
Serine/threonine kinase {ECO:0000313|EMBL:CCV06212.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
serine/threonine kinase rbh
S10_scaffold_496_curated_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5183..5680
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1L3_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53126.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S10_scaffold_496_curated_5
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5680..8121
DNA (2442bp) protein (814aa)
UPI0003CE7133 related cluster n=1 Tax=unknown RepID=UPI0003CE7133 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX15249.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein rbh
S10_scaffold_496_curated_6
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8170..8691)
DNA (522bp) protein (174aa)
Flagellar motor protein MotB n=2 Tax=Mesorhizobium RepID=V7GTX2_9RHIZ
Flagellar motor protein MotB {ECO:0000313|EMBL:ESZ11423.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
hypothetical protein
S10_scaffold_496_curated_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8913..11579
DNA (2667bp) protein (889aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036ED4AC rbh
Putative exported peptidase {ECO:0000313|EMBL:EHK53168.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
putative exported peptidase rbh
S10_scaffold_496_curated_trna_2
unknown

Not on your lists

comp(12296..12369)
DNA (74bp)
transferRNA Arg
S10_scaffold_496_curated_8
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12476..13180)
DNA (705bp) protein (235aa)
Glutathione S-transferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLA1_9RHIZ rbh
Glutathione S-transferase {ECO:0000313|EMBL:EIM24743.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
glutathione S-transferase
S10_scaffold_496_curated_9
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13342..14181
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000362918B rbh
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Urease accessory protein UreD rbh
S10_scaffold_496_curated_10
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14198..14500
DNA (303bp) protein (101aa)
Urease subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850};; Urea amidohydrolase subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
Urease subunit gamma n=1 Tax=Rhizobium sp. RepID=L0NJ09_RHISP
ureA; urease subunit gamma UreA
S10_scaffold_496_curated_11
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14509..14796
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J3BT58_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJL57094.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
urease-associated protein
S10_scaffold_496_curated_12
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14793..15395
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003615C99
HupE-UreJ family metal transporter
HupE-UreJ family metal transporter {ECO:0000313|EMBL:AEQ53529.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
S10_scaffold_496_curated_13
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15408..15713
DNA (306bp) protein (102aa)
Urease subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01954};; Urea amidohydrolase subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
urease subunit beta (EC:3.5.1.5)
Urease subunit beta n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCH6_MESCW
S10_scaffold_496_curated_14
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15740..16234)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BA8_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KFB08360.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
hypothetical protein
S10_scaffold_496_curated_15
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16325..16852)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTF4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AKI01596.1}; Flags: Precursor;; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
peptidoglycan bound protein (LPXTG motif)
S10_scaffold_496_curated_16
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17092..18804
DNA (1713bp) protein (571aa)
ureC; urease subunit alpha (EC:3.5.1.5) rbh
Urease subunit alpha {ECO:0000255|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01953};; Urea amidohydrolase subunit alpha {ECO:0000255|HAMAP-Rule:MF_01953}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Urease subunit alpha n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=URE1_MESSB rbh
S10_scaffold_496_curated_17
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18814..19398
DNA (585bp) protein (195aa)
Urease accessory protein UreE n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=UREE_RHILO
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
urease accessory protein UreE
S10_scaffold_496_curated_18
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19391..20062
DNA (672bp) protein (224aa)
UPI0003CFC597 related cluster n=1 Tax=unknown RepID=UPI0003CFC597
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Urease accessory protein UreF
S10_scaffold_496_curated_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20059..20694
DNA (636bp) protein (212aa)
Urease accessory protein UreG n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKJ7_9RHIZ rbh
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
urease accessory protein UreG rbh
S10_scaffold_496_curated_20
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20705..21283)
DNA (579bp) protein (193aa)
Nitrogen-fixing NifU-like protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C134_9RHIZ rbh
Scaffold protein Nfu/NifU {ECO:0000313|EMBL:CDX41710.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Scaffold protein Nfu/NifU rbh
S10_scaffold_496_curated_21
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21406..21897)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C133_9RHIZ
UspA {ECO:0000313|EMBL:KFB11416.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
hypothetical protein
S10_scaffold_496_curated_22
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21977..23044)
DNA (1068bp) protein (356aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
tryptophanyl-tRNA synthetase (EC:6.1.1.2) rbh
Tryptophan--tRNA ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKB1_9RHIZ rbh
S10_scaffold_496_curated_23
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23150..24715)
DNA (1566bp) protein (522aa)
Integral membrane protein MviN n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKA9_9RHIZ rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
integral membrane protein MviN rbh
S10_scaffold_496_curated_24
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24756..27575)
DNA (2820bp) protein (940aa)
protein-P-II uridylyltransferase (EC:2.7.7.59) rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKA8_9RHIZ rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S10_scaffold_496_curated_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27684..30386)
DNA (2703bp) protein (901aa)
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPK1_9RHIZ rbh
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EHK57344.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase rbh
S10_scaffold_496_curated_26
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30531..31460)
DNA (930bp) protein (310aa)
AraC family transcriptional regulator n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LN34_9RHIZ rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:EKF19149.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
AraC family transcriptional regulator rbh
S10_scaffold_496_curated_27
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31577..32770
DNA (1194bp) protein (398aa)
Purine ribonucleoside efflux pump NepI n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRL6_9RHIZ rbh
Purine ribonucleoside efflux pump NepI {ECO:0000313|EMBL:EYR83392.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
major facilitator superfamily transporter rbh
S10_scaffold_496_curated_28
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32839..33243)
DNA (405bp) protein (135aa)
Lactoylglutathione lyase family protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T9I3_9RHIZ
Lactoylglutathione lyase family protein {ECO:0000313|EMBL:EJJ28416.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein
S10_scaffold_496_curated_29
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33292..33738
DNA (447bp) protein (149aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2L4I6_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EJJ28417.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
marR family transcriptional regulator
Displaying items 1-30 of 72 in total

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