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S10_scaffold_2395_curated

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_2395_curated_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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587..1624
DNA (1038bp) protein (346aa)
Probable deoxyhypusine synthase {ECO:0000256|HAMAP-Rule:MF_00153}; Short=DHS {ECO:0000256|HAMAP-Rule:MF_00153};; EC=2.5.1.46 {ECO:0000256|HAMAP-Rule:MF_00153};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Deoxyhypusine synthase (EC:2.5.1.46)
Probable deoxyhypusine synthase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AX0_METBF rbh
S10_scaffold_2395_curated_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1688..2209
DNA (522bp) protein (174aa)
Transcriptional regulator, ArsR family n=2 Tax=Methanosarcina mazei RepID=Q8Q050_METMA rbh
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AKB83062.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
ArsR family transcriptional regulator rbh
S10_scaffold_2395_curated_3
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2209..2997
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AX2_METBF rbh
MarR family protein {ECO:0000313|EMBL:AKB83063.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
MarR family protein
S10_scaffold_2395_curated_4
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3242..3505)
DNA (264bp) protein (88aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB43484.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
S10_scaffold_2395_curated_5
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4017..4577
DNA (561bp) protein (187aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AX3_METBF rbh
Phosphodiesterase
S10_scaffold_2395_curated_6
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4728..4949)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AX4_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB83065.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_2395_curated_7
unknown

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5222..5401
DNA (180bp) protein (60aa)

This feature has no annotations

S10_scaffold_2395_curated_8
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5562..6464)
DNA (903bp) protein (301aa)
Methyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AX5_METBF rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB83066.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_2395_curated_9
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7432..8871
DNA (1440bp) protein (480aa)
ABC transporter, periplasmic binding protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AX6_METBF rbh
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA {ECO:0000313|EMBL:AKB83067.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA
S10_scaffold_2395_curated_10
unknown

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comp(9360..9536)
DNA (177bp) protein (59aa)

This feature has no annotations

S10_scaffold_2395_curated_11
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9934..10833
DNA (900bp) protein (300aa)
ABC transporter, permease protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AX8_METBF rbh
Dipeptide transport system permease protein DppC {ECO:0000313|EMBL:AKB83069.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Dipeptide transport system permease protein DppC
S10_scaffold_2395_curated_12
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12026..12571
DNA (546bp) protein (182aa)
ABC transporter, ATP-binding protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AY0_METBF rbh
Dipeptide transport ATP-binding protein DppF {ECO:0000313|EMBL:AKB83071.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Dipeptide transport ATP-binding protein DppF
Displaying 12 items

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