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S10_scaffold_1758_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_1758_curated_trna_1
unknown

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comp(171..242)
DNA (72bp)
transferRNA Gly
S10_scaffold_1758_curated_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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571..1908
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AQ2_METBF rbh
Putative oxidoreductase/HEAT repeat-containing protein {ECO:0000313|EMBL:AKB82999.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1758_curated_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2373..2810
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AQ1_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ71041.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
S10_scaffold_1758_curated_3
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3546..4886
DNA (1341bp) protein (447aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:AKB82998.1}; EC=3.1.-.- {ECO:0000313|EMBL:AKB82998.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AQ0_METBF rbh
S10_scaffold_1758_curated_4
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4908..5174
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AP9_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB51883.1}; TaxID=1434109 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri str. Wiesmoor.;"
S10_scaffold_1758_curated_5
Pelodiscus sinensis, Pelodiscus, Testudines, Chordata, Metazoa

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5131..5535
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Pelodiscus sinensis RepID=K7GA25_PELSI
Uncharacterized protein {ECO:0000313|Ensembl:ENSPSIP00000017136}; TaxID=13735 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus.;" source="Pelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis).;"
Membrane protein of unknown function
S10_scaffold_1758_curated_6
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5492..7729)
DNA (2238bp) protein (746aa)
Cell surface protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AP8_METBF rbh
Cell surface protein {ECO:0000313|EMBL:AKB82996.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Cell surface protein
S10_scaffold_1758_curated_7
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8232..8432
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AP7_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB82995.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1758_curated_8
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8577..9032
DNA (456bp) protein (152aa)
ATP-dependent DNA ligase {ECO:0000313|EMBL:AKB82994.1}; EC=6.5.1.1 {ECO:0000313|EMBL:AKB82994.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
ATP-dependent DNA ligase (EC:6.5.1.1)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AP6_METBF
S10_scaffold_1758_curated_9
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9089..9508
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AP5_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB82993.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1758_curated_10
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9501..10142
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AP4_METBF rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB82992.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1758_curated_11
unknown

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comp(10093..10239)
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 12 items

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