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S10_scaffold_1471_curated

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_1471_curated_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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217..1704
DNA (1488bp) protein (496aa)
tRNA-guanine(15) transglycosylase {ECO:0000256|HAMAP-Rule:MF_01634}; EC=2.4.2.48 {ECO:0000256|HAMAP-Rule:MF_01634};; 7-cyano-7-deazaguanine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01634}; Archaeal tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_01634}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
archaeosine tRNA-ribosyltransferase type 1 (EC:2.4.2.-)
tRNA-guanine(15) transglycosylase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=ATGT_METBF rbh
S10_scaffold_1471_curated_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2017..2967
DNA (951bp) protein (317aa)
UbiA prenyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DI5_METBF rbh
Digeranylgeranylglyceryl phosphate synthase {ECO:0000313|EMBL:AKB83877.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Digeranylgeranylglyceryl phosphate synthase
S10_scaffold_1471_curated_3
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2983..4140
DNA (1158bp) protein (386aa)
Bacteriochlorophyll synthase 43 kDa subunit n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DI4_METBF rbh
Geranylgeranyl/isoprenyl reductase {ECO:0000313|EMBL:AKB83878.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Geranylgeranyl/isoprenyl reductase
S10_scaffold_1471_curated_4
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4208..5347
DNA (1140bp) protein (380aa)
MoaA/NifB/PqqE family protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DI3_METBF rbh
Radical SAM domain protein {ECO:0000313|EMBL:AKB83879.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
radical SAM domain protein
S10_scaffold_1471_curated_5
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5626..6483)
DNA (858bp) protein (286aa)
Phosphoserine phosphatase (EC:3.1.3.3)
Phosphoserine phosphatase {ECO:0000313|EMBL:AKB42447.1}; EC=3.1.3.3 {ECO:0000313|EMBL:AKB42447.1};; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
Phosphoserine phosphatase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DI1_METBF rbh
S10_scaffold_1471_curated_6
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6533..7225)
DNA (693bp) protein (231aa)
Phosphoserine phosphatase (EC:3.1.3.3)
Phosphoserine phosphatase {ECO:0000313|EMBL:AKB42446.1}; EC=3.1.3.3 {ECO:0000313|EMBL:AKB42446.1};; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
Phosphoserine phosphatase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DI0_METBF rbh
S10_scaffold_1471_curated_7
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7642..8472
DNA (831bp) protein (277aa)
F420-dependent methylenetetrahydromethanopterin dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00058}; Short=MTD {ECO:0000256|HAMAP-Rule:MF_00058};; EC=1.5.98.1 {ECO:0000256|HAMAP-Rule:MF_00058};; Coenzyme F420-dependent N5,N10-methylenetetrahydromethanopterin dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00058}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
F420-dependent methylenetetrahydromethanopterin dehydrogenase (EC:1.5.98.1)
F420-dependent methylenetetrahydromethanopterin dehydrogenase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DH9_METBF rbh
S10_scaffold_1471_curated_8
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8740..9162)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DH8_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB83883.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1471_curated_9
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9258..9920)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DH7_METBF rbh
Thymidylate synthase {ECO:0000313|EMBL:AKB83884.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Thymidylate synthase
S10_scaffold_1471_curated_10
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10096..10713
DNA (618bp) protein (206aa)
Probable thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=KTHY_METBF rbh
S10_scaffold_1471_curated_11
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10819..11091)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DH5_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB42441.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
S10_scaffold_1471_curated_12
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11290..12018)
DNA (729bp) protein (243aa)
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DH4_METBF rbh
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase related protein
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase related protein {ECO:0000313|EMBL:AKB45942.1}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. Kolksee.;"
S10_scaffold_1471_curated_13
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12130..12765
DNA (636bp) protein (212aa)
UPF0264 protein Mbar_A1101 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Y1101_METBF rbh
UPF0264 protein MSBR3_3310 {ECO:0000256|HAMAP-Rule:MF_00681}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
duf556 family protein
Displaying 13 items

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