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S10_scaffold_3615_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_3615_curated_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..114
DNA (114bp) protein (38aa)
Trichohyalin {ECO:0000313|EMBL:AKB84046.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
S10_scaffold_3615_curated_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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75..899
DNA (825bp) protein (275aa)
Chemotaxis protein methyltransferase CheR {ECO:0000313|EMBL:AKB84047.1}; EC=2.1.1.80 {ECO:0000313|EMBL:AKB84047.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Chemotaxis protein methyltransferase CheR (EC:2.1.1.80)
Chemotaxis protein methyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DT8_METBF rbh
S10_scaffold_3615_curated_3
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1204..1683
DNA (480bp) protein (160aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=CHED_METBF
Chemotaxis protein CheD
S10_scaffold_3615_curated_trna_1
unknown

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comp(1795..1866)
DNA (72bp)
transferRNA Cys
S10_scaffold_3615_curated_4
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2118..2363
DNA (246bp) protein (82aa)
Tellurite resistance protein TehB n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KIJ0_9FIRM
Tellurite resistance protein TehB {ECO:0000313|EMBL:AKB84049.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Tellurite resistance protein TehB
S10_scaffold_3615_curated_5
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2397..2618)
DNA (222bp) protein (74aa)
IstB helper protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TH54_METAC
ATPase AAA {ECO:0000313|EMBL:KKG61828.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
istB; IstB helper protein
S10_scaffold_3615_curated_6
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2712..4220)
DNA (1509bp) protein (503aa)
Retron-type RNA-directed DNA polymerase {ECO:0000313|EMBL:AKB27143.1}; EC=2.7.7.49 {ECO:0000313|EMBL:AKB27143.1};; TaxID=1434120 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae T4/M.;"
Retron-type RNA-directed DNA polymerase (EC:2.7.7.49)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FA81_9CLOT rbh
S10_scaffold_3615_curated_7
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4721..5275)
DNA (555bp) protein (185aa)
IstB helper protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TH54_METAC rbh
Mobile element protein {ECO:0000313|EMBL:AKB38778.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
istB; IstB helper protein rbh
S10_scaffold_3615_curated_8
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5272..6021)
DNA (750bp) protein (250aa)
Transposase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PTL6_METMA rbh
Mobile element protein {ECO:0000313|EMBL:AKB38755.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
transposase rbh
S10_scaffold_3615_curated_9
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6053..7552)
DNA (1500bp) protein (500aa)
reverse transcriptase (EC:2.7.7.49) rbh
Reverse transcriptase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PTN0_METMA rbh
DNA polymerase {ECO:0000313|EMBL:KKH64777.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
S10_scaffold_3615_curated_10
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7979..8263)
DNA (285bp) protein (95aa)
Transposase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PTM1_METMA
Mobile element protein {ECO:0000313|EMBL:AKB62093.1}; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei SarPi.;"
transposase
Displaying 11 items

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