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S10_scaffold_2334_curated

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_2334_curated_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3..383
DNA (381bp) protein (127aa)
UPF0251 protein UNCMA_27150 n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Y2715_UNCMA
UPF0251 protein MSBR3_3039 {ECO:0000256|HAMAP-Rule:MF_00674}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
HTH DNA-binding protein
S10_scaffold_2334_curated_2
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

465..839
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W829_UNCMA
Uncharacterized protein {ECO:0000313|EMBL:AKB16139.1}; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila CHTI-55.;"
hypothetical protein
S10_scaffold_2334_curated_3
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

824..1207
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUQ6_METAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM03463.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
S10_scaffold_2334_curated_4
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1248..1937
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F45_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB83618.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_2334_curated_5
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2351..2749)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F44_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB83619.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_2334_curated_6
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2767..3096)
DNA (330bp) protein (110aa)
Putative carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:AKB83620.1}; EC=4.1.1.44 {ECO:0000313|EMBL:AKB83620.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
putative carboxymuconolactone decarboxylase family protein (EC:4.1.1.44)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PVK6_METMZ
S10_scaffold_2334_curated_7
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3165..3761)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F42_METBF rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB83621.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_2334_curated_8
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4226..4456
DNA (231bp) protein (77aa)
Transcriptional regulator, PadR family n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F41_METBF
Transcriptional regulator, PadR family
Transcriptional regulator, PadR family {ECO:0000313|EMBL:AKB56088.1}; TaxID=1434108 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri MS.;"
S10_scaffold_2334_curated_9
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4483..4974
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F40_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB56089.1}; TaxID=1434108 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri MS.;"
S10_scaffold_2334_curated_10
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4977..5645
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F39_METBF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB49735.1}; TaxID=1434109 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri str. Wiesmoor.;"
S10_scaffold_2334_curated_11
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5653..6045)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F38_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB83622.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_2334_curated_12
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6123..7208
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F37_METBF rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB83623.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_2334_curated_13
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7597..7830)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F36_METBF
DUF378 domain-containing protein {ECO:0000313|EMBL:AKB83624.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
DUF378 domain-containing protein
S10_scaffold_2334_curated_14
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8056..8226)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F35_METBF
Uncharacterized protein {ECO:0000313|EMBL:KKG11656.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
hypothetical protein
S10_scaffold_2334_curated_15
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8680..9447)
DNA (768bp) protein (256aa)
Deoxyribodipyrimidine photolyase, type II (EC:4.1.99.3)
Deoxyribodipyrimidine photolyase, type II {ECO:0000313|EMBL:AKB45200.1}; EC=4.1.99.3 {ECO:0000313|EMBL:AKB45200.1};; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
Deoxyribodipyrimidine photo-lyase type II n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F34_METBF rbh
Displaying 15 items

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