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S10_scaffold_1288_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_1288_curated_1
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..315
DNA (315bp) protein (105aa)
putative two-component system, response regulator id=7720564 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Contig_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03704.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
two component system response regulator
S10_scaffold_1288_curated_2
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

362..1492
DNA (1131bp) protein (377aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1) rbh
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XED2_9MICO rbh
S10_scaffold_1288_curated_3
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1489..1710)
DNA (222bp) protein (74aa)
hypothetical protein SPAM21_07033 id=7720566 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EPR77423.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
S10_scaffold_1288_curated_4
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1833..2942
DNA (1110bp) protein (370aa)
Flavine-dependent monooxygenase id=7720567 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Flavine-dependent monooxygenase {ECO:0000313|EMBL:EAR25873.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
oxidoreductase rbh
S10_scaffold_1288_curated_5
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2946..3503
DNA (558bp) protein (186aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
signal peptidase n=1 Tax=Agromyces subbeticus RepID=UPI0003B33A56
signal peptidase
S10_scaffold_1288_curated_6
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3500..4375)
DNA (876bp) protein (292aa)
Luciferase family protein id=7720576 bin=CNBR_ACT species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Monooxygenase {ECO:0000313|EMBL:KIF67378.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
hypothetical protein rbh
S10_scaffold_1288_curated_7
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4444..5607
DNA (1164bp) protein (388aa)
ATPase id=7720575 bin=CNBR_ACT species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
ATPase, RecF-like protein rbh
ATPase, RecF-like protein {ECO:0000313|EMBL:ADB31340.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
S10_scaffold_1288_curated_8
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5604..5786)
DNA (183bp) protein (61aa)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:KJL33710.1}; EC=3.4.16.4 {ECO:0000313|EMBL:KJL33710.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
peptidase M15 n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B33185
S10_scaffold_1288_curated_9
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(6101..7225)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI000365B030 rbh
oxidoreductase domain-containing protein rbh
Tax=Caldatribacterium saccharofermentans
S10_scaffold_1288_curated_10
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7222..8106)
DNA (885bp) protein (295aa)
Xylose isomerase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YYI9_9PROT
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
S10_scaffold_1288_curated_11
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8281..9216
DNA (936bp) protein (312aa)
oxidoreductase n=1 Tax=Glaciibacter superstes RepID=UPI0003B5C147 rbh
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:ABR61298.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
S10_scaffold_1288_curated_12
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9213..9833
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003489B95
2-dehydro-3-deoxyphosphogluconate aldolase {ECO:0000313|EMBL:KDA06766.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
2-dehydro-3-deoxyphosphogluconate aldolase
S10_scaffold_1288_curated_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9830..10738
DNA (909bp) protein (303aa)
Aryldialkylphosphatase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XF35_NAKMY rbh
aryldialkylphosphatase rbh
Aryldialkylphosphatase {ECO:0000313|EMBL:ACV77921.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
S10_scaffold_1288_curated_14
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10747..11769)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Streptomyces rapamycinicus RepID=UPI0003830B13 rbh
2-deoxy-scyllo-inosamine dehydrogenase {ECO:0000313|EMBL:EXU63289.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
hypothetical protein
S10_scaffold_1288_curated_15
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11788..13128)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003798B3E rbh
Tax=RBG_16_Planctomycetes_64_12_curated
S10_scaffold_1288_curated_16
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13125..14108)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI000377C64A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL25024.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
S10_scaffold_1288_curated_17
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14113..14976)
DNA (864bp) protein (288aa)
Transcriptional regulator n=1 Tax=Microbacterium sp. TS-1 RepID=U2YNF0_9MICO rbh
Transcriptional regulator {ECO:0000313|EMBL:GAD34669.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
transcriptional regulator rbh
Displaying 17 items

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