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S10_scaffold_88_curated

Search features with annotation key words

Displaying items 1-30 of 215 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_88_curated_1
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1034)
DNA (1032bp) protein (344aa)
pepP; aminopeptidase; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] id=7719535 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Aminopeptidase P {ECO:0000313|EMBL:EAR23809.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
pepP; aminopeptidase rbh
S10_scaffold_88_curated_2
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1082..2092)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4ALC3_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR23810.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
conserved membrane protein with hydrolase activity rbh
S10_scaffold_88_curated_3
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2153..3007
DNA (855bp) protein (285aa)
hypothetical protein; K07053 id=7719533 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR23811.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein rbh
S10_scaffold_88_curated_4
unknown

Not on your lists

comp(3020..3604)
DNA (585bp) protein (195aa)

This feature has no annotations

S10_scaffold_88_curated_5
Arthrobacter arilaitensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3684..4118)
DNA (435bp) protein (145aa)
Conserved hypothetical membrane protein n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VZX1_ARTAR
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:CBT77174.1}; TaxID=861360 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 /; Re117).;"
S10_scaffold_88_curated_6
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4158..5534)
DNA (1377bp) protein (459aa)
rhlE; ATP-dependent RNA helicase id=7719532 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
ATP-dependent RNA helicase {ECO:0000313|EMBL:EPR75749.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
RNA helicase
S10_scaffold_88_curated_7
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5757..6434
DNA (678bp) protein (226aa)
hypothetical protein id=7719531 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EPR75750.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
S10_scaffold_88_curated_8
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6458..6739)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287B7EB
Uncharacterized protein {ECO:0000313|EMBL:EAR23819.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
S10_scaffold_88_curated_9
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6756..6980)
DNA (225bp) protein (75aa)
hypothetical protein id=7719529 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Putative ATP-binding protein {ECO:0000313|EMBL:EPR75752.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
Protein of unknown function (DUF3107)
S10_scaffold_88_curated_10
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7062..10151
DNA (3090bp) protein (1030aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
ATP-dependent DNA helicase id=7719528 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
ATP-dependent DNA helicase rbh
S10_scaffold_88_curated_11
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10144..13329
DNA (3186bp) protein (1062aa)
ATP-dependent DNA helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] id=7719527 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rathayibacter.;" source="Rathayibacter toxicus.;"
ATP-dependent DNA helicase
S10_scaffold_88_curated_12
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13331..14197)
DNA (867bp) protein (289aa)
LysR family transcriptional regulator id=7719526 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Transcriptional regulator {ECO:0000313|EMBL:EPR75755.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
LysR family transcriptional regulator rbh
S10_scaffold_88_curated_13
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14316..15611
DNA (1296bp) protein (432aa)
major facilitator transporter id=7719525 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Integral membrane efflux protein {ECO:0000313|EMBL:EAR23824.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
major facilitator transporter rbh
S10_scaffold_88_curated_14
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15624..16616)
DNA (993bp) protein (331aa)
macrolide 2''''-phosphotransferase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287DCBF rbh
Macrolide 2'-phosphotransferase {ECO:0000313|EMBL:EAR23825.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
putative phosphotransferase rbh
S10_scaffold_88_curated_15
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16684..17619
DNA (936bp) protein (312aa)
hydrolase; K03426 NAD+ diphosphatase [EC:3.6.1.22] id=7719523 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
NADH pyrophosphatase {ECO:0000313|EMBL:EPR75758.1}; EC=3.6.1.22 {ECO:0000313|EMBL:EPR75758.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
putative NTP pyrophosphohydrolase rbh
S10_scaffold_88_curated_16
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17616..19277
DNA (1662bp) protein (554aa)
ATP-dependent DNA helicase II; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] id=7719522 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
ATP-dependent DNA helicase II rbh
S10_scaffold_88_curated_17
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19183..20067)
DNA (885bp) protein (295aa)
hypothetical protein id=7719521 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR23828.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
S10_scaffold_88_curated_18
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20130..21416)
DNA (1287bp) protein (429aa)
hypothetical protein id=7719520 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EPR75761.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein rbh
S10_scaffold_88_curated_19
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21663..22703
DNA (1041bp) protein (347aa)
hypothetical protein; K07177 PDZ domain-containing protein id=7719519 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Secreted protein {ECO:0000313|EMBL:EAR23830.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
ATP-dependant serine peptidase containing a PDZ domain rbh
S10_scaffold_88_curated_20
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22782..25700
DNA (2919bp) protein (973aa)
hypothetical protein; K09118 hypothetical protein id=7719518 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
UPF0182 protein A20C1_13311 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein rbh
S10_scaffold_88_curated_trna_1
unknown

Not on your lists

25841..25914
DNA (74bp)
transferRNA Met
S10_scaffold_88_curated_21
Gordonia sp. no. 9, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26244..26882
DNA (639bp) protein (213aa)
Putative two-component response regulator n=1 Tax=Gordonia sihwensis NBRC 108236 RepID=L7LMI6_9ACTO
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJR08125.1}; TaxID=1617449 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. no. 9.;"
putative two-component system response regulator
S10_scaffold_88_curated_22
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26879..28048
DNA (1170bp) protein (390aa)
two-component system sensor kinase id=7720840 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
ATPase domain-containing protein
ATPase domain protein {ECO:0000313|EMBL:AEF42967.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
S10_scaffold_88_curated_23
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

28045..29037
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B7975F
hypothetical protein
Tax=BJP_IG2157_Actinomycetales_63_19
S10_scaffold_88_curated_24
unknown

Not on your lists

29177..30247
DNA (1071bp) protein (357aa)

This feature has no annotations

S10_scaffold_88_curated_25
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30529..31569)
DNA (1041bp) protein (347aa)
thermophilic glucose-6-phosphate isomerase-like enzyme; K01569 oxalate decarboxylase [EC:4.1.1.2] id=7719440 bin=CNBR_ACT species=Mycobacterium rhodesiae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Bicupin, oxalate decarboxylase family {ECO:0000313|EMBL:CDJ99289.1}; EC=4.1.1.2 {ECO:0000313|EMBL:CDJ99289.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
decarboxylase rbh
S10_scaffold_88_curated_26
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31624..32016
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031A4AE6
Uncharacterized protein {ECO:0000313|EMBL:KJC63878.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
transferase hexapeptide repeat containing protein
S10_scaffold_88_curated_27
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32013..33692)
DNA (1680bp) protein (560aa)
hypothetical protein
Regulatory protein, LuxR {ECO:0000313|EMBL:AIY19392.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain id=7721894 bin=CNBR_ACT species=Microbacterium testaceum genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
S10_scaffold_88_curated_28
unknown

Not on your lists

33835..34230
DNA (396bp) protein (132aa)

This feature has no annotations

S10_scaffold_88_curated_29
unknown

Not on your lists

comp(34252..34935)
DNA (684bp) protein (228aa)

This feature has no annotations

Displaying items 1-30 of 215 in total

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