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S10_scaffold_556_curated

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_556_curated_1
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(2..1483)
DNA (1482bp) protein (494aa)
ffh; signal recognition particle subunit SRP54; K03106 signal recognition particle subunit SRP54 id=7721583 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
ffh; signal recognition particle subunit SRP54 rbh
S10_scaffold_556_curated_2
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1535..2065
DNA (531bp) protein (177aa)
Putative siderophore binding protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AH31_9ACTN
Putative siderophore binding protein {ECO:0000313|EMBL:EAR25656.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase
S10_scaffold_556_curated_3
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2075..2449
DNA (375bp) protein (125aa)
bleomycin resistance protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B56DC4
Bleomycin resistance protein {ECO:0000313|EMBL:CCI53389.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;"
lactoylglutathione lyase
S10_scaffold_556_curated_4
unknown

Not on your lists

comp(2450..2719)
DNA (270bp) protein (90aa)
id=7721580 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACT organism_group=Actinobacteria
S10_scaffold_556_curated_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2850..3143
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TFX8_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK73597.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
S10_scaffold_556_curated_6
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3156..4025)
DNA (870bp) protein (290aa)
Signal recognition particle receptor id=7721578 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Signal recognition particle receptor protein {ECO:0000313|EMBL:EPR76813.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
signal recognition particle receptor rbh
S10_scaffold_556_curated_7
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4079..4321)
DNA (243bp) protein (81aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B5E56
transcriptional regulator of sugar metabolism
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
S10_scaffold_556_curated_8
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4339..4722
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000345DFD4
Uncharacterized protein {ECO:0000313|EMBL:KJL23616.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
S10_scaffold_556_curated_9
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4719..5696
DNA (978bp) protein (326aa)
PfkB domain-containing protein n=2 Tax=Microbacterium RepID=H8E3M1_9MICO rbh
Contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92737.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
PfkB domain-containing protein rbh
S10_scaffold_556_curated_10
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6468..7478)
DNA (1011bp) protein (337aa)
oxidoreductase n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI0003669AAF
oxidoreductase domain-containing protein
Oxidoreductase {ECO:0000313|EMBL:KIC68996.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
S10_scaffold_556_curated_11
unknown

Not on your lists

comp(7482..8060)
DNA (579bp) protein (193aa)

This feature has no annotations

S10_scaffold_556_curated_12
Arthrobacter sp. IHBB 11108, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8195..9061)
DNA (867bp) protein (289aa)
sugar ABC transporter permease n=1 Tax=Agromyces italicus RepID=UPI0003B7968E rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJT42791.1}; TaxID=1618207 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. IHBB 11108.;"
S10_scaffold_556_curated_13
Arthrobacter sp. IHBB 11108, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9058..9990)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037542BD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJT42790.1}; TaxID=1618207 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. IHBB 11108.;"
S10_scaffold_556_curated_14
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9987..11300)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B46A43 rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH87161.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
hypothetical protein
S10_scaffold_556_curated_15
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11393..13306)
DNA (1914bp) protein (638aa)
Mannan endo-1,4-beta-mannosidase n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C4I8_STRBB rbh
mannan endo-1,4-beta-mannosidase rbh
Mannan endo-1,4-beta-mannosidase {ECO:0000313|EMBL:ADI06039.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
S10_scaffold_556_curated_16
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13317..14102)
DNA (786bp) protein (262aa)
Short chain dehydrogenase/reductase family oxidoreductase n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WML3_9ACTO rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDR02082.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
short-chain dehydrogenase/reductase SDR
S10_scaffold_556_curated_17
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14195..15028
DNA (834bp) protein (278aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Arthrobacter sp. SJCon RepID=L8TT71_9MICC
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:ELT44990.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;"
S10_scaffold_556_curated_18
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15025..15705)
DNA (681bp) protein (227aa)
GntR family transcriptional regulator n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U2A206_9MICC
GntR family transcriptional regulator {ECO:0000313|EMBL:KHL04909.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
transcription regulator, GntR family
S10_scaffold_556_curated_19
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15771..16625)
DNA (855bp) protein (285aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F5E0_MODMB rbh
Epimerase {ECO:0000313|EMBL:KGH46463.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
xylose isomerase domain-containing protein rbh
S10_scaffold_556_curated_20
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(16622..18142)
DNA (1521bp) protein (507aa)
Glycosyl hydrolase family 32 domain protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TD20_9FIRM
Glycosyl hydrolase family 32 domain protein {ECO:0000313|EMBL:CDC71333.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
glycosyl hydrolase family 32 protein
S10_scaffold_556_curated_21
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18267..21887)
DNA (3621bp) protein (1207aa)
chromosome segregation protein SMC n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288E656 rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
chromosome structure maintenance protein rbh
S10_scaffold_556_curated_22
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22050..23108
DNA (1059bp) protein (353aa)
Putative uncharacterized protein id=7721576 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ80100.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
hypothetical protein
S10_scaffold_556_curated_23
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23108..24187
DNA (1080bp) protein (360aa)
acetyltransferase n=1 Tax=Glaciibacter superstes RepID=UPI0003B60AF4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ80100.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
hypothetical protein
S10_scaffold_556_curated_24
Gordonia araii, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24218..24508)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Gordonia araii NBRC 100433 RepID=G7H3Z5_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB10570.1}; TaxID=1073574 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia araii NBRC 100433.;"
hypothetical protein
S10_scaffold_556_curated_25
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24505..24738)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6ADK3_LEIXX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAT89543.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
S10_scaffold_556_curated_26
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24786..25940)
DNA (1155bp) protein (385aa)
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:EPR76688.1}; EC=1.3.8.6 {ECO:0000313|EMBL:EPR76688.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
Glutaryl-CoA dehydrogenase n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XL33_9MICO rbh
acyl-CoA dehydrogenase-like protein rbh
S10_scaffold_556_curated_27
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25974..26897)
DNA (924bp) protein (308aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|SAAS:SAAS00020852}; EC=3.2.2.- {ECO:0000256|SAAS:SAAS00275239};; EC=3.2.2.23 {ECO:0000256|SAAS:SAAS00020832};; EC=4.2.99.18 {ECO:0000256|SAAS:SAAS00054019};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
mutM; formamidopyrimidine-DNA glycosylase (EC:3.2.2.23) rbh
Formamidopyrimidine-DNA glycosylase id=7721572 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
S10_scaffold_556_curated_28
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26913..27602)
DNA (690bp) protein (230aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
rnc; ribonuclease III (EC:3.1.26.3) rbh
ribonuclease III id=7721571 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
S10_scaffold_556_curated_29
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(27634..27837)
DNA (204bp) protein (68aa)
50S ribosomal protein L32 id=7721570 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
rpmF; hypothetical protein
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
S10_scaffold_556_curated_30
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27859..28395)
DNA (537bp) protein (179aa)
Putative uncharacterized protein id=7721569 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR23867.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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