ggKbase home page

S10_scaffold_396_curated

Search features with annotation key words

Displaying items 1-30 of 42 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_396_curated_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..484)
DNA (483bp) protein (161aa)
hypothetical protein, partial n=1 Tax=Curtobacterium sp. B18 RepID=UPI0003B5F8D6
3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EXJ50738.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
serA; phosphoglycerate dehydrogenase
S10_scaffold_396_curated_2
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

601..978
DNA (378bp) protein (126aa)
hypothetical protein SPAM21_04258 id=7721493 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR23918.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
S10_scaffold_396_curated_3
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(992..1939)
DNA (948bp) protein (316aa)
NADPH:quinone reductase n=1 Tax=Agromyces subbeticus RepID=UPI0003B7551C
NADPH:quinone reductase {ECO:0000313|EMBL:KGM02019.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
NADPH:quinone reductase and related Zn-dependent oxidoreductase
S10_scaffold_396_curated_4
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1936..2868)
DNA (933bp) protein (311aa)
NADPH:quinone reductase and related Zn-dependent oxidoreductase-like protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AYC6_STRRD
NADPH:quinone reductase-like protein
NADPH:quinone reductase and related Zn-dependent oxidoreductase-like protein {ECO:0000313|EMBL:ACZ87136.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
S10_scaffold_396_curated_5
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2865..3200)
DNA (336bp) protein (112aa)
PadR family transcriptional regulator n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W2F2_9ACTO
PadR family transcriptional regulator
PadR family transcriptional regulator {ECO:0000313|EMBL:AGZ42155.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
S10_scaffold_396_curated_6
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3269..3688)
DNA (420bp) protein (140aa)
id=7721492 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:ERG65014.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
S10_scaffold_396_curated_7
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3690..4082)
DNA (393bp) protein (131aa)
id=7721491 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EYT59418.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
S10_scaffold_396_curated_8
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4079..5233)
DNA (1155bp) protein (385aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
mannitol-1-phosphate 5-dehydrogenase (EC:1.1.1.17) rbh
Mannitol-1-phosphate 5-dehydrogenase id=7721490 bin=CNBR_ACT species=Arthrobacter sp. SJCon genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
S10_scaffold_396_curated_9
unknown

Not on your lists

comp(5263..6324)
DNA (1062bp) protein (354aa)

This feature has no annotations

S10_scaffold_396_curated_10
unknown

Not on your lists

6386..7033
DNA (648bp) protein (216aa)
UPI0003C7F4CA related cluster n=1 Tax=unknown RepID=UPI0003C7F4CA
S10_scaffold_396_curated_11
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7047..10241)
DNA (3195bp) protein (1065aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00037705C2 rbh
Uncharacterized protein {ECO:0000313|EMBL:CEA09884.1}; Flags: Precursor;; TaxID=1461584 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
Uncharacterized protein yvnB
S10_scaffold_396_curated_12
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10380..11783)
DNA (1404bp) protein (468aa)
bglA; beta-glucosidase (EC:3.2.1.21); K05350 beta-glucosidase [EC:3.2.1.21] id=7719624 bin=CNBR_ACT species=unknown genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
glycoside hydrolase family protein rbh
S10_scaffold_396_curated_13
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11780..13123)
DNA (1344bp) protein (448aa)
FAD-linked oxidoreductase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028A05C4 rbh
FAD-dependent oxidoreductase {ECO:0000313|EMBL:EAR24507.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
FAD-linked oxidoreductase
S10_scaffold_396_curated_14
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13120..14346)
DNA (1227bp) protein (409aa)
hypothetical protein id=7719626 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR24506.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein rbh
S10_scaffold_396_curated_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14346..15605)
DNA (1260bp) protein (420aa)
permease of the major facilitator superfamily id=7719627 bin=CNBR_ACT species=Microbacterium testaceum genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK73434.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
S10_scaffold_396_curated_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15606..16274)
DNA (669bp) protein (223aa)
TetR family transcriptional regulator id=7719628 bin=CNBR_ACT species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERK73433.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
TetR family transcriptional regulator
S10_scaffold_396_curated_trna_1
unknown

Not on your lists

comp(16448..16521)
DNA (74bp)
transferRNA Leu
S10_scaffold_396_curated_17
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16553..17872)
DNA (1320bp) protein (440aa)
dehydrogenase; K03885 NADH dehydrogenase [EC:1.6.99.3] id=7719651 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
NADH dehydrogenase, type 2 {ECO:0000313|EMBL:EAR24498.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
dehydrogenase rbh
S10_scaffold_396_curated_18
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17909..19147)
DNA (1239bp) protein (413aa)
serine protease id=7719652 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Serine protease {ECO:0000313|EMBL:EAR24497.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
serine peptidase rbh
S10_scaffold_396_curated_19
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19144..19854)
DNA (711bp) protein (237aa)
hypothetical protein; K09009 hypothetical protein id=7719653 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:KJL24954.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
S10_scaffold_396_curated_20
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19851..20360)
DNA (510bp) protein (170aa)
hypothetical protein id=7719654 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage {ECO:0000313|EMBL:EPR75241.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
S10_scaffold_396_curated_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20425..21705)
DNA (1281bp) protein (427aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] id=7719655 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
eno; enolase (EC:4.2.1.11)
S10_scaffold_396_curated_22
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21718..22494)
DNA (777bp) protein (259aa)
Alpha/beta hydrolase fold protein n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1UPT6_9MICC
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EMY32401.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
hydrolase
S10_scaffold_396_curated_23
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22491..22925)
DNA (435bp) protein (145aa)
MarR family transcriptional regulator n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1UTL4_9MICC
MarR family transcriptional regulator {ECO:0000313|EMBL:EMY32400.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
transcriptional regulator, MarR family
S10_scaffold_396_curated_24
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(22961..24238)
DNA (1278bp) protein (426aa)
histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=7719656 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
hisS; hypothetical protein (EC:6.1.1.21) rbh
Histidyl-tRNA synthetase {ECO:0000313|EMBL:EAR24492.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
S10_scaffold_396_curated_25
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24251..24892)
DNA (642bp) protein (214aa)
Transcriptional regulator, TetR family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AJB8_9ACTN
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:EAR24491.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
TetR family transcriptional regulator
S10_scaffold_396_curated_26
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25142..25795)
DNA (654bp) protein (218aa)
Nucleoside triphosphate pyrophosphohydrolase MazG {ECO:0000313|EMBL:EPR75246.1}; EC=3.6.1.8 {ECO:0000313|EMBL:EPR75246.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19)
Nucleoside triphosphate pyrophosphohydrolase MazG n=1 Tax=Leifsonia rubra CMS 76R RepID=S7VYM6_9MICO rbh
S10_scaffold_396_curated_27
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25851..26426
DNA (576bp) protein (192aa)
nuclease id=7719659 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Thermonuclease {ECO:0000313|EMBL:EAR24488.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
nuclease-like protein
S10_scaffold_396_curated_28
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26471..30937)
DNA (4467bp) protein (1489aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EPR76592.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EPR76592.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B637A4 rbh
hypothetical protein
S10_scaffold_396_curated_29
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31026..32453)
DNA (1428bp) protein (476aa)
transport protein id=7719662 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
transport protein rbh
Putative integral membrane transport protein {ECO:0000313|EMBL:CAQ01418.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
Displaying items 1-30 of 42 in total

View Taxonomy