ggKbase home page

S12_scaffold_331_curated

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_331_curated_1
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..174)
DNA (174bp) protein (58aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RLN0_ACCPU
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
S12_scaffold_331_curated_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162..1670)
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00038053B2 rbh
UDP-N-acetylmuramyl-tripeptide synthetase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_331_curated_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1703..3430)
DNA (1728bp) protein (576aa)
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMT3_AZOSU rbh
cell division protein FtsI/penicillin-binding protein 2
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_331_curated_4
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3427..3705)
DNA (279bp) protein (93aa)
Cell division protein FtsL n=2 Tax=Methylovorus RepID=C6X981_METSD
ftsL; cell division protein ftsl
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
S12_scaffold_331_curated_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3707..4684)
DNA (978bp) protein (326aa)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CP31_SIDLE rbh
S-adenosyl-methyltransferase MraW rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
S12_scaffold_331_curated_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4681..5169)
DNA (489bp) protein (163aa)
Protein MraZ n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z0P0_9RHOO
cell division protein MraZ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_331_curated_7
unknown

Not on your lists

5526..5621
DNA (96bp) protein (32aa)

This feature has no annotations

S12_scaffold_331_curated_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5712..6338
DNA (627bp) protein (209aa)
LuxR family transcriptional regulator n=1 Tax=Thauera phenylacetica B4P RepID=N6YVX0_9RHOO
LuxR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_331_curated_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6556..7308
DNA (753bp) protein (251aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Burkholderia kururiensis RepID=UPI00034D14F9
cAMP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_331_curated_10
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7753..8430
DNA (678bp) protein (226aa)
Dienelactone hydrolase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VPB5_POLNA
dienelactone hydrolase
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
S12_scaffold_331_curated_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8427..10238)
DNA (1812bp) protein (604aa)
Glycoside hydrolase family protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAE8_9PROT rbh
glycoside hydrolase family protein rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_331_curated_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10397..11752)
DNA (1356bp) protein (452aa)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJX0_9PROT rbh
glucose-1-phosphate adenylyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_331_curated_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11825..12130)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B5E5_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_331_curated_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12496..13989
DNA (1494bp) protein (498aa)
glycogen/starch synthase (EC:2.4.1.21) rbh
Glycogen synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKH9_9PROT rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_331_curated_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14054..16612)
DNA (2559bp) protein (853aa)
Glycogen phosphorylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJU9_9PROT rbh
alpha-glucan phosphorylase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_331_curated_16
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16835..17821)
DNA (987bp) protein (329aa)
Methyltransferase n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RPV8_ALLVD
methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
S12_scaffold_331_curated_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17978..18919)
DNA (942bp) protein (314aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI0003602AC1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_331_curated_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19029..20867)
DNA (1839bp) protein (613aa)
Fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNF3_AZOSU rbh
fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_331_curated_19
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21146..23671
DNA (2526bp) protein (842aa)
Acyl-coenzyme A dehydrogenase n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RDE4_9RHOO rbh
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
S12_scaffold_331_curated_20
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23714..25009
DNA (1296bp) protein (432aa)
fadA; acetyl-CoA acetyltransferase (EC:2.3.1.9) rbh
Beta-subunit of fatty acid oxidation complex, 3-keto-acyl-CoA-thiolase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5K2_AROAE rbh
Beta-subunit of fatty acid oxidation complex, 3-keto-acyl-CoA-thiolase {ECO:0000313|EMBL:CAI07410.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
S12_scaffold_331_curated_21
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25006..26958
DNA (1953bp) protein (651aa)
enoyl-CoA hydratase n=1 Tax=Azoarcus toluclasticus RepID=UPI00035E9968 rbh
fadB; alpha-subunit of fatty acid oxidation complex rbh
Tax=RBG_16_Betaproteobacteria_64_18_curated
S12_scaffold_331_curated_22
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27266..27667
DNA (402bp) protein (134aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VW77_9BURK
Chemotaxis protein CheY {ECO:0000313|EMBL:KFB70648.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
S12_scaffold_331_curated_23
unknown

Not on your lists

27709..27888
DNA (180bp) protein (60aa)

This feature has no annotations

S12_scaffold_331_curated_24
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27866..28015)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DS85_9PROT
Mg/Co/Ni transporter MgtE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
S12_scaffold_331_curated_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28287..29093
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D825C
transcriptional regulator, Crp/Fnr family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_331_curated_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29260..29880)
DNA (621bp) protein (207aa)
Transport-associated n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q223L7_RHOFD
transport protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_331_curated_27
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30319..30759
DNA (441bp) protein (147aa)
TolA protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VZ35_9BURK
TolA protein {ECO:0000313|EMBL:EGF32134.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
mucin-associated surface protein
S12_scaffold_331_curated_28
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30863..31498)
DNA (636bp) protein (212aa)
Putative toluene tolerance protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PX95_9RHOO
ttg2D; putative toluene tolerance protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
S12_scaffold_331_curated_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31649..32350)
DNA (702bp) protein (234aa)
signal peptide protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00036CC588
signal peptide protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_331_curated_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32547..32765)
DNA (219bp) protein (73aa)
17 kDa surface antigen n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q223M0_RHOFD
17 kDa surface antigen
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Displaying items 1-30 of 51 in total

View Taxonomy