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S12_scaffold_310_curated

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_310_curated_1

Not on your lists

comp(112..972)
DNA (861bp) protein (287aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
Putative 3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YHC5_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:KKN89122.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S12_scaffold_310_curated_2
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1005..1949)
DNA (945bp) protein (315aa)
Putative glycerate dehydrogenase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HSQ8_AZOC5 rbh
glycerate dehydrogenase rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
S12_scaffold_310_curated_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1946..2707)
DNA (762bp) protein (254aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Burkholderia sp. BT03 RepID=J3C4P0_9BURK rbh
HpcH/HpaI aldolase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
S12_scaffold_310_curated_4
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2740..3414)
DNA (675bp) protein (225aa)
L-lactate dehydrogenase LldD n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M1P3_9BACL
L-lactate dehydrogenase LldD {ECO:0000313|EMBL:EST51835.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
L-lactate dehydrogenase LldD
S12_scaffold_310_curated_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3486..3803)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035F36E5
NIPSNAP family containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
S12_scaffold_310_curated_6
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3898..4986)
DNA (1089bp) protein (363aa)
Alkane 1-monooxygenase n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TBV7_BURPP rbh
fatty acid desaturase family protein
Fatty acid desaturase family protein {ECO:0000313|EMBL:AJZ64061.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
S12_scaffold_310_curated_7

Not on your lists

5322..5936
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PLP4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH95845.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
S12_scaffold_310_curated_8
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5990..6475
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GLP6_NITSI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ01870.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
S12_scaffold_310_curated_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6629..6856
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1F5_ROSS1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
S12_scaffold_310_curated_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6939..7250
DNA (312bp) protein (104aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_310_curated_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7252..7431
DNA (180bp) protein (60aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_310_curated_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7487..8269
DNA (783bp) protein (261aa)
2-oxo-hepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LN57_9RHIZ rbh
hpcG; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
S12_scaffold_310_curated_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8353..9591)
DNA (1239bp) protein (413aa)
NnrS family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUD7_POLNA rbh
NnrS family protein rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_310_curated_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9624..10067)
DNA (444bp) protein (148aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=mine drainage metagenome RepID=T1BUA3_9ZZZZ
isoprenylcysteine carboxyl methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_310_curated_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10167..11831
DNA (1665bp) protein (555aa)
Putative ABC transport ATP-binding subunit n=4 Tax=Bordetella RepID=K0M8G0_BORPB rbh
ABC transporter ATP-binding protein rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_310_curated_16
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11884..12855)
DNA (972bp) protein (324aa)
Adenylate/guanylate cyclase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTI6_SIDLE
adenylate/guanylate cyclase
Tax=RBG_16_Gallionellales_56_9_curated
S12_scaffold_310_curated_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13060..13953
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002DD2264 rbh
bile acid:sodium symporter rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_310_curated_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13972..14730)
DNA (759bp) protein (253aa)
Short-chain dehydrogenase id=2247805 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
oxidoreductase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_310_curated_19
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14873..15589)
DNA (717bp) protein (239aa)
Flagellar brake protein YcgR id=2035678 bin=GWE2_Gallionellales_58_10 species=Burkholderia glumae genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
YcgR family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
S12_scaffold_310_curated_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15726..17804)
DNA (2079bp) protein (693aa)
Nucleoside recognition domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIL1_ACCPU rbh
nucleoside recognition domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_310_curated_21
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17897..18934
DNA (1038bp) protein (346aa)
Candidate periplasmic component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5Z0_RAMTT rbh
dctP; periplasmic protein rbh
Candidate periplasmic component {ECO:0000313|EMBL:AEG91494.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
S12_scaffold_310_curated_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18964..19641)
DNA (678bp) protein (226aa)
Methyltransferase type 11 n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QSW8_9DELT
type 11 methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_310_curated_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19818..21470
DNA (1653bp) protein (551aa)
peptide chain release factor 3 n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002EF542A rbh
prfC; peptide chain release factor 3
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_310_curated_24
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22003..22590
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Ralstonia solanacearum RepID=B5SC69_RALSL
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
S12_scaffold_310_curated_25
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22658..24259
DNA (1602bp) protein (534aa)
Thiosulfate sulfurtransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKP6_9PROT rbh
putative thiosulfate sulfurtransferase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
S12_scaffold_310_curated_26
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24296..26194)
DNA (1899bp) protein (633aa)
potassium transporter Kup n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003797E0B rbh
potassium transporter rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
S12_scaffold_310_curated_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26297..26509)
DNA (213bp) protein (71aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_310_curated_28
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26628..27023)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9W9D2_9RALS
endoribonuclease L-PSP family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
S12_scaffold_310_curated_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27163..27915
DNA (753bp) protein (251aa)
Silent information regulator protein Sir2 id=4803147 bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
Silent information regulator protein Sir2 rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_310_curated_30
unknown

Not on your lists

comp(28021..28239)
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying items 1-30 of 58 in total

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