name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S12_scaffold_395_curated_1
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..1464)
|
Putative type II DNA modification enzyme n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WHG9_VEREI
rbh
putative type II DNA modification enzyme
rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
|
|
S12_scaffold_395_curated_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1763..2065
|
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GDF0_NITSI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
S12_scaffold_395_curated_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2200..2487
|
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WJQ9_DELAC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
S12_scaffold_395_curated_4
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2536..2778)
|
Ribonuclease VapC n=1 Tax=Thauera phenylacetica B4P RepID=N6ZQ77_9RHOO
PilT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
|
|
S12_scaffold_395_curated_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3405..3827
|
Thioesterase superfamily protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFA4_ACIET
Variovorax paradoxus strain MEDvA23 contig_33, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31420.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
thioesterase superfamily protein
|
|
S12_scaffold_395_curated_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3821..4396)
|
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000368636B
putative dissimilatory sulfite reductase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
S12_scaffold_395_curated_7
unknown
|
Not on your lists |
4689..4853
|
This feature has no annotations |
|
S12_scaffold_395_curated_8
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4946..6031
|
L-lactate dehydrogenase (EC:1.1.1.27)
Malate/lactate dehydrogenase n=1 Tax=Polaromonas sp. CF318 RepID=J2LP66_9BURK
rbh
Lactate dehydrogenase {ECO:0000313|EMBL:KDP88506.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
|
|
S12_scaffold_395_curated_9
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6276..7070
|
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D368_BRAJP
rbh
hypothetical protein
rbh
Tax=RBG_16_Betaproteobacteria_66_20_curated
|
|
S12_scaffold_395_curated_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7586..7864
|
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003789E59
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
|
|
S12_scaffold_395_curated_11
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7965..8420)
|
Putative acetyltransferase n=2 Tax=Bordetella bronchiseptica RepID=K4TEL0_BORBO
acetyltransferase
Acetyltransferase (GNAT) domain protein {ECO:0000313|EMBL:KDD58828.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
|
|
S12_scaffold_395_curated_12
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8574..9362
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQI8_PARL1
rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:GAK46535.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
short-chain dehydrogenase/reductase SDR
rbh
|
|
S12_scaffold_395_curated_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9571..10971
|
asparaginyl-tRNA synthetase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003712B20
rbh
asnC; asparaginyl-tRNA synthetase
rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
|
|
S12_scaffold_395_curated_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11012..11953)
|
Peptidase M28 n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IUT6_9GAMM
rbh
aminopeptidase
rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
|
|
S12_scaffold_395_curated_15
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12011..13852)
|
AMP-forming long-chain acyl-CoA synthetase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y7Q6_THIV6
rbh
AMP-forming long-chain acyl-CoA synthetase
rbh
AMP-forming long-chain acyl-CoA synthetase {ECO:0000313|EMBL:AFL73024.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
|
|
S12_scaffold_395_curated_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13993..15195)
|
atoB3; acetyl-CoA acetyltransferase (EC:2.3.1.9)
rbh
Thiolase, N-terminal domain subfamily, putative n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QY91_9RHOB
rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
S12_scaffold_395_curated_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15259..16698)
|
3-Oxoacyl-(Acyl-carrier-protein) synthase III C terminal domain n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QY90_9RHOB
rbh
hypothetical protein
rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
S12_scaffold_395_curated_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16793..17386)
|
UPI00039FC365 related cluster n=1 Tax=unknown RepID=UPI00039FC365
nitroreductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
|
|
S12_scaffold_395_curated_19
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17392..18240)
|
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037AB8E7
rbh
hypothetical protein
rbh
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
|
|
S12_scaffold_395_curated_20
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18237..19850)
|
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00035CF4E3
rbh
von Willebrand factor type A (vWA) domain-containing protein
rbh
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
|
|
S12_scaffold_395_curated_21
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19847..21268)
|
ATPase AAA n=1 Tax=Methyloversatilis universalis RepID=UPI0003690345
rbh
ATPase, ATPase associated with various cellular activities AAA_5
rbh
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
|
|
S12_scaffold_395_curated_22
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21351..26018)
|
glutamate synthase [NADPH] large subunit (EC:1.4.1.13)
glutamate synthase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000317CDB0
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
|
|
S12_scaffold_395_curated_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26143..27492)
|
glutamate dehydrogenase (EC:1.4.1.4)
rbh
Glutamate dehydrogenase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZJ9_GEODF
rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
S12_scaffold_395_curated_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27614..30190)
|
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like id=4943368 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
rbh
phosphoenolpyruvate synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
S12_scaffold_395_curated_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30600..31235)
|
cytoplasmic chaperone TorD family protein
Cytoplasmic chaperone TorD family protein id=2299551 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
S12_scaffold_395_curated_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31311..32081)
|
4Fe-4S binding domain protein
4Fe-4S ferredoxin iron-sulfur binding domain protein id=4708255 bin=GWC2_Nitrospirae_57_13 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|
|
S12_scaffold_395_curated_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32116..34665)
|
Molybdopterin oxidoreductase id=3977494 bin=GWF2_Lentisphaerae_52_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
rbh
molybdopterin oxidoreductase, ArrA like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|
|
S12_scaffold_395_curated_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34943..36280)
|
arxR; two component, sigma54 specific, transcriptional regulator, Fis family id=12553693 bin=BDI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
rbh
arxR; two component, sigma54 specific, transcriptional regulator, Fis family
rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|
|
S12_scaffold_395_curated_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(36277..37737)
|
arxS; integral membrane sensor signal transduction histidine kinase id=12553694 bin=BDI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
rbh
arxS; integral membrane sensor signal transduction histidine kinase
rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|
|
S12_scaffold_395_curated_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(37753..38604)
|
arxX; phosphonate-binding periplasmic protein id=12553695 bin=BDI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
rbh
arxX; phosphonate-binding periplasmic protein
rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|