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S12_scaffold_426_curated

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Displaying items 1-30 of 55 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_426_curated_1
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..288
DNA (288bp) protein (96aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase-like protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K251_9PROT
Acyl-CoA dehydrogenase-like protein {ECO:0000313|EMBL:EKE71570.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
S12_scaffold_426_curated_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

344..1567
DNA (1224bp) protein (408aa)
L-carnitine dehydratase/bile acid-inducible protein F (EC:2.8.3.16) rbh
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2E8Y9_9BURK rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_426_curated_3
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1571..2764
DNA (1194bp) protein (398aa)
Acyl-transferase carnitine dehydratase n=1 Tax=Ralstonia sp. PBA RepID=I9BWQ1_9RALS rbh
Acyl-transferase carnitine dehydratase {ECO:0000313|EMBL:EIZ04333.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
acyl-CoA transferase rbh
S12_scaffold_426_curated_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2892..3860)
DNA (969bp) protein (323aa)
Branched-chain amino acid ABC transporter, permease protein id=4594145 bin=GWF2_Methylomirabilis_70_14 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
inner-membrane translocator rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_426_curated_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3871..4758)
DNA (888bp) protein (296aa)
Inner-membrane translocator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIJ7_9BURK rbh
putative branched-chain amino acid ABC transporter, permease component rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_426_curated_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4862..6073)
DNA (1212bp) protein (404aa)
ABC transporter substrate-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIJ8_9BURK rbh
ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_426_curated_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6121..6858)
DNA (738bp) protein (246aa)
histidinol dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F12605 rbh
ABC transporter rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_426_curated_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6851..7603)
DNA (753bp) protein (251aa)
ABC transporter related protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) PF6_RHOPX">RepID=E6VPF6_RHOPX rbh
ABC transporter-like protein rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_426_curated_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7779..8582)
DNA (804bp) protein (268aa)
enoyl-CoA hydratase n=1 Tax=Azoarcus toluclasticus RepID=UPI0003759A15 rbh
paaF2; enoyl-CoA hydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_426_curated_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8604..10247)
DNA (1644bp) protein (548aa)
Acetyl-CoA synthetase id=4681021 bin=GWC2_Methylomirabilis_70_16 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
acyl-CoA synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_426_curated_11
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10490..11572)
DNA (1083bp) protein (361aa)
Peptidase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REG3_PHEZH
peptidase
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
S12_scaffold_426_curated_12
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11835..12587
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036E4AAD rbh
oxidoreductase
Tax=RBG_16_Betaproteobacteria_64_18_curated
S12_scaffold_426_curated_13
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12809..13711)
DNA (903bp) protein (301aa)
HD family phosphohydrolase n=1 Tax=Moritella dasanensis RepID=UPI00036ABA2D
putative metal dependent phosphohydrolase
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
S12_scaffold_426_curated_14
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14304..14531)
DNA (228bp) protein (76aa)
Type I secretion membrane fusion protein, HlyD family n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M4Y8_GEODF
HlyD family type I secretion membrane fusion protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
S12_scaffold_426_curated_15
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14578..15426
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTE7_SORCE rbh
hypothetical protein rbh
Tax=RBG_16_Betaproteobacteria_64_18_curated
S12_scaffold_426_curated_16
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15434..16156)
DNA (723bp) protein (241aa)
dnaQ; DNA polymerase III, epsilon subunit (EC:2.7.7.7)
DNA polymerase III, epsilon subunit n=5 Tax=Burkholderia multivorans RepID=B9BBA0_9BURK
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
S12_scaffold_426_curated_17
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16153..17601)
DNA (1449bp) protein (483aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHA1_AZOSU rbh
NodT family efflux transporter outer membrane lipoprotein rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
S12_scaffold_426_curated_18
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17598..20729)
DNA (3132bp) protein (1044aa)
transporter n=1 Tax=Methylotenera versatilis RepID=UPI000377A4F8 rbh
hydrophobe/amphiphile efflux-1 (HAE1) family transporter rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
S12_scaffold_426_curated_19
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20742..21932)
DNA (1191bp) protein (397aa)
Acriflavine resistance protein A n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RCW3_9RHOO rbh
secretion protein HlyD rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
S12_scaffold_426_curated_20
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22135..22596)
DNA (462bp) protein (154aa)
rnhA; RnhA (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D556_LARHH
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
S12_scaffold_426_curated_21
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22593..23333)
DNA (741bp) protein (247aa)
methyltransferase type 11 n=1 Tax=Azoarcus toluclasticus RepID=UPI000370BB6B
generic methyl-transferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
S12_scaffold_426_curated_22
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23347..24126
DNA (780bp) protein (260aa)
hydroxyacylglutathione hydrolase (EC:3.1.2.6) rbh
Hydroxyacylglutathione hydrolase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AK75_9PROT rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
S12_scaffold_426_curated_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24331..25848
DNA (1518bp) protein (506aa)
LysM repeat-containing protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QQ29_AZOSU rbh
LysM repeat-containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_426_curated_24
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25920..27944)
DNA (2025bp) protein (675aa)
peptide ABC transporter ATPase (EC:3.6.3.24 3.6.3.31) rbh
Peptide ABC transporter ATPase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B2U6_9PROT rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
S12_scaffold_426_curated_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28047..29528)
DNA (1482bp) protein (494aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6J8_NITMU rbh
binding-protein dependent transport system inner membrane protein rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
S12_scaffold_426_curated_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29528..30505)
DNA (978bp) protein (326aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUS6_ACCPU rbh
binding-protein-dependent transport systems inner membrane component rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
S12_scaffold_426_curated_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30513..32684)
DNA (2172bp) protein (724aa)
Extracellular solute-binding protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AK69_9PROT rbh
extracellular solute-binding protein rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
S12_scaffold_426_curated_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32854..33642
DNA (789bp) protein (263aa)
fabI1; enoyl-acyl carrier protein reductase (EC:1.3.1.9) rbh
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K5T1_AZOSB rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
S12_scaffold_426_curated_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33671..35566)
DNA (1896bp) protein (632aa)
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EQ2_DECAR rbh
PpiC-type peptidyl-prolyl cis-trans isomerase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_426_curated_trna_3
unknown

Not on your lists

comp(35626..35699)
DNA (74bp)
transferRNA Asp
Displaying items 1-30 of 55 in total

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