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S12_scaffold_429_curated

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Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_429_curated_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35..748)
DNA (714bp) protein (238aa)
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase id=2104824 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_429_curated_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(760..1347)
DNA (588bp) protein (196aa)
Maf-like protein Mfla_1513 n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Y1513_METFK
maf protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_429_curated_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1418..1834)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XXE4_PSEMY
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_429_curated_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1911..2393
DNA (483bp) protein (161aa)
Putative metal-binding protein, possibly nucleic-acid binding protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMG9_AZOSU
putative metal-binding protein, possibly nucleic-acid binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_429_curated_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2405..2584
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=1 Tax=Azoarcus sp. KH32C RepID=H0PU37_9RHOO
rpmF; 50S ribosomal protein L32
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_429_curated_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2675..3703
DNA (1029bp) protein (343aa)
Phosphate acyltransferase n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=PLSX_METFK rbh
glycerol-3-phosphate acyltransferase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_429_curated_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3700..4659
DNA (960bp) protein (320aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMH2_AZOSU rbh
3-oxoacyl-(acyl-carrier-protein) synthase III rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
S12_scaffold_429_curated_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4681..5616
DNA (936bp) protein (312aa)
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
malonyl CoA-ACP transacylase n=1 Tax=Burkholderia kururiensis RepID=UPI0003463587 rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
S12_scaffold_429_curated_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5619..6359
DNA (741bp) protein (247aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMH4_AZOSU rbh
3-oxoacyl-(acyl-carrier-protein) reductase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
S12_scaffold_429_curated_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6445..6687
DNA (243bp) protein (81aa)
Acyl carrier protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=ACP_AZOSB
acpP; acyl carrier protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
S12_scaffold_429_curated_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6724..7962
DNA (1239bp) protein (413aa)
fabF; beta-ketoacyl synthase (EC:2.3.1.179) rbh
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AC81_9PROT rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
S12_scaffold_429_curated_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8022..8384
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AKV5_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_429_curated_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8602..9201
DNA (600bp) protein (200aa)
RNA polymerase sigma factor n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMH9_AZOSU rbh
RNA polymerase sigma factor RpoE rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_429_curated_14
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9206..9703
DNA (498bp) protein (166aa)
Anti sigma-E protein, RseA n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRC6_SIDLE
anti sigma-E protein, RseA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
S12_scaffold_429_curated_15
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9700..10656
DNA (957bp) protein (319aa)
Sigma factor regulatory protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PU26_9RHOO
rseB; sigma factor regulatory protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
S12_scaffold_429_curated_16
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10736..12148
DNA (1413bp) protein (471aa)
protease Do (EC:3.4.21.107) rbh
peptidase n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00035DFEEC rbh
Tax=RBG_16_Betaproteobacteria_64_18_curated
S12_scaffold_429_curated_17
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12189..12428
DNA (240bp) protein (80aa)
Glutaredoxin-like domain (DUF836) n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMI2_AZOSU
glutaredoxin domain-containing protein
Tax=BJP_IG2103_Dechloromonas_63_51
S12_scaffold_429_curated_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12459..14267
DNA (1809bp) protein (603aa)
Elongation factor 4 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=LEPA_NITMU rbh
GTP-binding protein LepA rbh
Tax=RBG_16_Betaproteobacteria_64_18_curated
S12_scaffold_429_curated_19
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14613..15401
DNA (789bp) protein (263aa)
Signal peptidase I n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMI4_AZOSU rbh
signal peptidase I rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
S12_scaffold_429_curated_20
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15573..15947
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037F7FC4
membrane protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
S12_scaffold_429_curated_21
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15965..16633
DNA (669bp) protein (223aa)
rnc; Ribonuclease III (RNase III) (EC:3.1.26.3)
Ribonuclease 3 n=2 Tax=Ralstonia solanacearum RepID=D8NL76_RALSL
Tax=RBG_16_Betaproteobacteria_64_18_curated
S12_scaffold_429_curated_22
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16630..17523
DNA (894bp) protein (298aa)
GTPase Era n=1 Tax=Azoarcus toluclasticus RepID=UPI0003796291 rbh
GTP-binding protein Era rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S12_scaffold_429_curated_23
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17723..18439
DNA (717bp) protein (239aa)
DNA repair protein RecO n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AC38_9PROT
DNA repair protein RecO
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
S12_scaffold_429_curated_24
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18436..19161
DNA (726bp) protein (242aa)
Pyridoxine 5'-phosphate synthase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=PDXJ_CUPTR rbh
pdxJ; pyridoxine 5'-phosphate synthase rbh
Tax=RBG_16_Betaproteobacteria_64_18_curated
S12_scaffold_429_curated_25
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19158..19547
DNA (390bp) protein (130aa)
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=ACPS_NITEU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
S12_scaffold_429_curated_26
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19540..20589
DNA (1050bp) protein (350aa)
Beta-hexosaminidase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFC8_GALCS rbh
glycoside hydrolase family protein rbh
Tax=GWA2_Gallionellales_59_43_curated
S12_scaffold_429_curated_27
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20632..21285
DNA (654bp) protein (218aa)
Uracil-DNA glycosylase n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z7I3_9GAMM
SPO1 DNA polymerase
Tax=BJP_S1_SUB10_Methylophilales_55_32
S12_scaffold_429_curated_28
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21282..23108
DNA (1827bp) protein (609aa)
UvrABC system protein C n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=UVRC_NITMU rbh
uvrC; excinuclease ABC subunit C rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
S12_scaffold_429_curated_29
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23225..23794
DNA (570bp) protein (190aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ29_9PROT
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:KIO49135.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase
S12_scaffold_429_curated_trna_1
unknown

Not on your lists

23833..23905
DNA (73bp)
transferRNA Gly
Displaying items 1-30 of 49 in total

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