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S12_scaffold_838_curated

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Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_838_curated_1
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..854
DNA (852bp) protein (284aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
F0F1 ATP synthase subunit beta (EC:3.6.3.14) rbh
ATP synthase subunit beta n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B1G7_9PROT rbh
S12_scaffold_838_curated_2
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

844..1236
DNA (393bp) protein (131aa)
F0F1 ATP synthase subunit epsilon (EC:3.6.3.14)
H+-transporting two-sector ATPase, delta/epsilon subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21ZA5_RHOFD
H+-transporting two-sector ATPase, delta/epsilon subunit {ECO:0000313|EMBL:ABD68898.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S12_scaffold_838_curated_3
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1226..1564
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003782085
F0F1-ATPase
F0F1-ATPase subunit, putative {ECO:0000313|EMBL:ABD68899.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S12_scaffold_838_curated_4
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1551..1865
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21ZA3_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD68900.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S12_scaffold_838_curated_5
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1855..2574
DNA (720bp) protein (240aa)
F0F1 ATP synthase subunit A (EC:3.6.3.14) rbh
ATP synthase subunit a n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=ATP6_RHOFD rbh
ATP synthase subunit a {ECO:0000255|HAMAP-Rule:MF_01393}; ATP synthase F0 sector subunit a {ECO:0000255|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000255|HAMAP-Rule:MF_01393}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S12_scaffold_838_curated_6
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2606..2887
DNA (282bp) protein (94aa)
F0F1 ATP synthase subunit C n=1 Tax=Methylovulum miyakonense RepID=UPI0003764146
F0F1 ATP synthase subunit C
H+-transporting two-sector ATPase, C subunit {ECO:0000313|EMBL:ABD68902.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S12_scaffold_838_curated_7
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2891..3754
DNA (864bp) protein (288aa)
ATP synthase subunit b 2 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) PF2_RHOFD">RepID=ATPF2_RHOFD rbh
H+-transporting two-sector ATPase, B/B' subunit rbh
ATP synthase subunit b 2 {ECO:0000255|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b 2 {ECO:0000255|HAMAP-Rule:MF_01398}; ATPase subunit I 2 {ECO:0000255|HAMAP-Rule:MF_01398}; F-type ATPase subunit b 2 {ECO:0000255|HAMAP-Rule:MF_01398}; Short=F-ATPase subunit b 2 {ECO:0000255|HAMAP-Rule:MF_01398};; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S12_scaffold_838_curated_8
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3757..5304
DNA (1548bp) protein (516aa)
F0F1 ATP synthase subunit alpha (EC:3.6.3.14) rbh
ATP synthase subunit alpha 2 {ECO:0000255|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha 2 {ECO:0000255|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha 2 {ECO:0000255|HAMAP-Rule:MF_01346}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
ATP synthase subunit alpha 2 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=ATPA2_RHOFD rbh
S12_scaffold_838_curated_9
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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5301..6206
DNA (906bp) protein (302aa)
Alternate F1F0 ATPase, F1 subunit gamma n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LQ33_DESBD rbh
alternate F1F0 ATPase F1 subunit gamma rbh
Alternate F1F0 ATPase, F1 subunit gamma {ECO:0000313|EMBL:ACU89059.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
S12_scaffold_838_curated_10
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6249..7592
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G2K2_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EMS81578.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source="Desulfotignum phosphitoxidans DSM 13687.;"
hypothetical protein rbh
S12_scaffold_838_curated_11
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7595..7861
DNA (267bp) protein (89aa)
polyphosphate:nucleotide phosphotransferase n=1 Tax=Methylobacter marinus RepID=UPI000378EF24
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
S12_scaffold_838_curated_12
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7907..8824)
DNA (918bp) protein (306aa)
hypothetical protein; K09144 hypothetical protein id=12498438 bin=THIO_MID species=Verminephrobacter aporrectodeae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
S12_scaffold_838_curated_13
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(8821..9558)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LN32_RALME rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
S12_scaffold_838_curated_14
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9924..10148
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q478H9_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO31314.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
S12_scaffold_838_curated_15
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10233..10658)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000379A5FF
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
S12_scaffold_838_curated_16
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10837..11379
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000360E021
sigma-24 (FecI)
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
S12_scaffold_838_curated_17
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11376..12077
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036057E1
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
S12_scaffold_838_curated_18
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12106..12690)
DNA (585bp) protein (195aa)
Glutathione S-transferase, N-terminal domain protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TS39_ACIAC
glutathione s-transferase domain-containing protein
Glutathione s-transferase domain-containing protein {ECO:0000313|EMBL:BAO31315.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
S12_scaffold_838_curated_19
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12701..13147
DNA (447bp) protein (149aa)
Putative transposase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNN4_9BURK
Putative transposase {ECO:0000313|EMBL:EHR72019.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
putative transposase
S12_scaffold_838_curated_20
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13578..14669
DNA (1092bp) protein (364aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Transaldolase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABC3_9PROT rbh
transaldolase rbh
S12_scaffold_838_curated_21
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14666..15913
DNA (1248bp) protein (416aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
Acetate kinase n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YME9_9DELT rbh
acetate kinase rbh
S12_scaffold_838_curated_22
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16216..16608
DNA (393bp) protein (131aa)
Heavy metal transport/detoxification protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VVT4_POLNA
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ABM39762.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
S12_scaffold_838_curated_23
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16995..19430
DNA (2436bp) protein (812aa)
Copper-exporting P-type ATPase B {ECO:0000313|EMBL:KFB74129.1}; EC=3.6.3.- {ECO:0000313|EMBL:KFB74129.1};; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
copper-translocating P-type ATPase (EC:3.6.3.4) rbh
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036FCF21 rbh
S12_scaffold_838_curated_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19727..19969
DNA (243bp) protein (81aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_838_curated_25
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20111..20659
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUL6_SIDLE
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
S12_scaffold_838_curated_26
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20781..21170
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ALU4_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
S12_scaffold_838_curated_27
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21218..21823
DNA (606bp) protein (202aa)
sulfurtransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036BBF02 rbh
rhodanese-like protein
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
S12_scaffold_838_curated_28
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22012..24393
DNA (2382bp) protein (794aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
Probable phosphoketolase n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GEQ1_NITSI rbh
phosphoketolase rbh
S12_scaffold_838_curated_29
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24507..25109
DNA (603bp) protein (201aa)
LemA protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XNE7_9ALTE rbh
LemA family protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
S12_scaffold_838_curated_30
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25138..27078
DNA (1941bp) protein (647aa)
Heat shock protein HtpX n=1 Tax=Glaciecola arctica BSs20135 RepID=K6YZJ9_9ALTE rbh
peptidase M48 Ste24p rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
Displaying items 1-30 of 37 in total

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