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S12_scaffold_522_curated

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Displaying items 1-30 of 53 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_522_curated_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..335)
DNA (333bp) protein (111aa)
Cytochrome B561 n=1 Tax=Sulfuricella denitrificans skB26 RepID=K6V474_9PROT
cytochrome B561
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S12_scaffold_522_curated_2
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(349..1950)
DNA (1602bp) protein (534aa)
InterPro: Octaheme c-type cytochrome (IPR024673). Multiheme cytochrome with 8 CxxCH motifs, transmembrane domain on one end, signal peptide on the other.
Cytochrome c family protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9Z8_9PROT rbh
cytochrome c family protein rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
S12_scaffold_522_curated_3
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2530..2766)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B2T8_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
S12_scaffold_522_curated_4
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2791..3801)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B2T8_9PROT rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
S12_scaffold_522_curated_5
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3870..4271)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00035D7DCB
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
S12_scaffold_522_curated_6
unknown

Not on your lists

comp(4297..4434)
DNA (138bp) protein (46aa)

This feature has no annotations

S12_scaffold_522_curated_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4992..5441)
DNA (450bp) protein (150aa)
Universal stress protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PWG4_9RHOO
putative universal stress protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_522_curated_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5492..5953)
DNA (462bp) protein (154aa)
DnaK suppressor protein; K06204 DnaK suppressor protein id=12556579 bin=CNBR_ACIDO species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dksA_[C]; C4-type zinc finger protein, DksA/TraR family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_522_curated_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6052..7647
DNA (1596bp) protein (532aa)
4-hydroxyphenylacetate 3-hydroxylase n=1 Tax=Burkholderia bryophila RepID=UPI0003753D89 rbh
vinylacetyl-CoA delta-isomerase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_522_curated_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7712..8281
DNA (570bp) protein (190aa)
Membrane protein n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U1U4_ALCXX
membrane protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
S12_scaffold_522_curated_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8494..9084
DNA (591bp) protein (197aa)
Putative nuclease n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K5F4_AZOSB
putative nuclease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_522_curated_12
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9035..10147
DNA (1113bp) protein (371aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SUC8_JANMA rbh
hypothetical protein rbh
Uncharacterized conserved protein {ECO:0000313|EMBL:ABR90987.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
S12_scaffold_522_curated_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10144..10758
DNA (615bp) protein (205aa)
DNA repair protein n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PT12_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_522_curated_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10804..11808
DNA (1005bp) protein (335aa)
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2) rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=ACCA_DECAR rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_522_curated_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11777..13162
DNA (1386bp) protein (462aa)
tRNA(Ile)-lysidine synthase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRQ7_SIDLE rbh
tRNA(Ile)-lysidine synthetase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_522_curated_16
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13238..13645
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PNJ3_9ZZZZ
uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:BAP87298.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
S12_scaffold_522_curated_17
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13642..14019
DNA (378bp) protein (126aa)
Regulatory protein MarR n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEB3_GALCS
regulatory protein MarR
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
S12_scaffold_522_curated_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14332..14562
DNA (231bp) protein (77aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
S12_scaffold_522_curated_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14559..14972
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TQU2_9CYAN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
S12_scaffold_522_curated_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15233..15658
DNA (426bp) protein (142aa)
Nucleoside diphosphate kinase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DW99_9PROT
ndk; nucleoside diphosphate kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_522_curated_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15672..16757
DNA (1086bp) protein (362aa)
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACJ3_9PROT rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_522_curated_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16751..17554
DNA (804bp) protein (268aa)
Type IV pilus biogenesis/stability protein PilW n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI73_AZOSU
type IV pilus biogenesis/stability protein PilW
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_522_curated_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17551..18426
DNA (876bp) protein (292aa)
XRE family transcriptional regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AHJ5_9PROT
XRE family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_522_curated_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18431..19732
DNA (1302bp) protein (434aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IXJ7_PSEUL rbh
gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_522_curated_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19787..21037
DNA (1251bp) protein (417aa)
Histidine--tRNA ligase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=SYH_DECAR rbh
hisS; histidyl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_522_curated_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21158..21799
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN42_ACCPU
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_522_curated_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21796..22986
DNA (1191bp) protein (397aa)
Outer membrane protein assembly factor BamB n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B4W8_9PROT rbh
outer membrane assembly lipoprotein YfgL rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_522_curated_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23080..24405
DNA (1326bp) protein (442aa)
GTPase Der n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKY3_9PROT rbh
engA; GTP-binding protein EngA rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_522_curated_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24490..24732
DNA (243bp) protein (81aa)
RNA-binding protein Hfq n=2 Tax=Pseudogulbenkiania RepID=G2IXJ2_PSEUL
RNA chaperone Hfq
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
S12_scaffold_522_curated_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24765..25916
DNA (1152bp) protein (384aa)
GTPase HflX n=1 Tax=Thauera sp. 63 RepID=N6XXD5_9RHOO rbh
GTP-binding proten HflX
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Displaying items 1-30 of 53 in total

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