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S12_scaffold_418_curated

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Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_418_curated_1
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..336)
DNA (336bp) protein (112aa)
Acylphosphatase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JUA2_9GAMM
acylphosphatase
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
S12_scaffold_418_curated_2
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(333..1274)
DNA (942bp) protein (314aa)
Hydrogenase accessory protein HypB n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R09_RHOFD rbh
hydrogenase accessory protein HypB
Tax=GWA2_Rhodocyclales_65_20_curated
S12_scaffold_418_curated_3
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1309..1650)
DNA (342bp) protein (114aa)
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q7WXM9_CUPNH
hypA2; HypA2
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S12_scaffold_418_curated_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1904..3208)
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE16 RepID=UPI00036FEC02
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_418_curated_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3205..4404)
DNA (1200bp) protein (400aa)
Metal-dependent phosphohydrolase, HD subdomain n=2 Tax=Nitrosococcus oceani RepID=Q3JE70_NITOC
metal dependent phosphohydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_418_curated_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4406..6769)
DNA (2364bp) protein (788aa)
GAF and PAS/PAC sensor-containing adenylate/guanylate cyclase
Adenylate/Guanylate Cyclase id=2085011 bin=GWD2_Deltaproteobacteria_55_8 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_418_curated_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7074..7691)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BLR18 RepID=C0INL8_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_418_curated_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7944..9533
DNA (1590bp) protein (530aa)
glutamate-cysteine ligase (EC:6.3.2.2) rbh
Glutamate--cysteine ligase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q127I4_POLSJ rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_418_curated_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9563..9892
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HQB0_ACHXA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_418_curated_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9900..10526)
DNA (627bp) protein (209aa)
MutT/nudix family protein id=4388224 bin=GWA2_Methylomirabilis_73_35 species=Frankia alni genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
S12_scaffold_418_curated_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10559..11509)
DNA (951bp) protein (317aa)
Putative 2-hydroxyacid dehydrogenase id=4950929 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S12_scaffold_418_curated_trna_3
unknown

Not on your lists

comp(11516..11588)
DNA (73bp)
transferRNA Glu
S12_scaffold_418_curated_trna_2
unknown

Not on your lists

comp(11623..11702)
DNA (80bp)
transferRNA Ala
S12_scaffold_418_curated_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11752..13152)
DNA (1401bp) protein (467aa)
Glutamate--tRNA ligase n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GIQ5_NITSI rbh
glutamyl-tRNA synthetase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_418_curated_trna_1
unknown

Not on your lists

13246..13317
DNA (72bp)
transferRNA Val
S12_scaffold_418_curated_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13405..14076)
DNA (672bp) protein (224aa)
Phosphoglycerate mutase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CR08_VARPS
phosphoglycerate mutase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_418_curated_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14144..14512)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=2 Tax=Methylococcus capsulatus RepID=Q605W2_METCA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_418_curated_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14619..15053)
DNA (435bp) protein (145aa)
UspA n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H75_DECAR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_418_curated_16
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15152..15853)
DNA (702bp) protein (234aa)
membrane protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036F7988
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL25493.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
S12_scaffold_418_curated_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15857..17272)
DNA (1416bp) protein (472aa)
hemN; coproporphyrinogen III oxidase (EC:1.3.3.3) rbh
Coproporphyrinogen-III oxidase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K564_AZOSB rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_418_curated_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17311..18090
DNA (780bp) protein (260aa)
cAMP-binding protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFG7_AZOSU rbh
cAMP-binding protein rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_418_curated_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18174..18617)
DNA (444bp) protein (148aa)
Universal stress protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPW2_AZOSU
universal stress protein UspA-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S12_scaffold_418_curated_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18640..18939)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037C18AD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S12_scaffold_418_curated_21
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18936..19466)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47I57_DECAR
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
S12_scaffold_418_curated_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19474..20919)
DNA (1446bp) protein (482aa)
4Fe-4S ferredoxin id=1266360 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
4Fe-4S ferredoxin rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
S12_scaffold_418_curated_23
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21043..21981)
DNA (939bp) protein (313aa)
ccoP; cb-type cytochrome c oxidase subunit III (EC:1.9.3.1) rbh
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PJ68_9BURK rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
S12_scaffold_418_curated_24
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21978..22145)
DNA (168bp) protein (56aa)
Cytochrome c oxidase subunit CcoQ {ECO:0000313|EMBL:CDS53250.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CDS53250.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
Cbb3-type cytochrome oxidase component n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQV6_9BURK
cbb3-type cytochrome oxidase subunit
S12_scaffold_418_curated_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22148..22762)
DNA (615bp) protein (205aa)
ccoO; cbb3-type cytochrome c oxidase subunit II (EC:1.9.3.1) rbh
peptidase S41 n=1 Tax=Massilia niastensis RepID=UPI00037480B9 rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
S12_scaffold_418_curated_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22778..24208)
DNA (1431bp) protein (477aa)
cytochrome c oxidase, cbb3-type subunit I (EC:1.9.3.1) rbh
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Acidovorax sp. CF316 RepID=J0KDP2_9BURK rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
S12_scaffold_418_curated_27
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24399..26054)
DNA (1656bp) protein (552aa)
hypothetical protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002EEB8D4 rbh
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
Displaying items 1-30 of 44 in total

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