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S12_scaffold_631_curated

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_631_curated_1
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..336)
DNA (336bp) protein (112aa)
General L-amino acid transport ATP-binding protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EU99_BRASB
aapP; general L-amino acid transport ATP-binding protein
General L-amino acid transport ATP-binding protein {ECO:0000313|EMBL:ABQ39743.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
S12_scaffold_631_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(351..1730)
DNA (1380bp) protein (460aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL76_9RHIZ rbh
Putative amino acid ABC transport, permease protein {ECO:0000313|EMBL:KFC69075.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
polar amino acid ABC transporter inner membrane subunit rbh
S12_scaffold_631_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1741..2937)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000375B410 rbh
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:KFC69076.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
polar amino acid ABC transporter inner membrane subunit rbh
S12_scaffold_631_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3313..4452)
DNA (1140bp) protein (380aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00035EBA4F
Putative amino-acid ABC transporter, substrate-binding protein {ECO:0000313|EMBL:KFC69077.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cationic amino acid ABC transporter substrate-binding protein
S12_scaffold_631_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4498..5520)
DNA (1023bp) protein (341aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00035EBA4F rbh
Cationic amino acid ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:KFC69079.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cationic amino acid ABC transporter periplasmic binding protein rbh
S12_scaffold_631_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5785..6975
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D615D8 rbh
Cystathionine beta-lyase {ECO:0000313|EMBL:KFC69080.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cystathionine beta-lyase rbh
S12_scaffold_631_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7160..8578)
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F25EF8 rbh
Exopolyphosphatase {ECO:0000313|EMBL:KFC61635.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Ppx/GppA phosphatase rbh
S12_scaffold_631_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8670..10901)
DNA (2232bp) protein (744aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
polyphosphate kinase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030B9027 rbh
polyphosphate kinase rbh
S12_scaffold_631_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10987..11685)
DNA (699bp) protein (233aa)
Chromosomal replication initiator DnaA n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LUC4_METRJ
Regulatory inactivation of DnaA Hda protein {ECO:0000313|EMBL:KFC61631.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
chromosomal replication initiator DnaA
S12_scaffold_631_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11692..12801)
DNA (1110bp) protein (370aa)
Putative permease n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWZ2_9RHIZ rbh
Putative permease {ECO:0000313|EMBL:KFC61630.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
S12_scaffold_631_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12895..13425)
DNA (531bp) protein (177aa)
Phosphatidylglycerophosphate synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWZ1_9RHIZ
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:KFC61629.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
CDP-alcohol phosphatidyltransferase
S12_scaffold_631_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13601..14674
DNA (1074bp) protein (358aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZKJ8_METPB rbh
phosphoribosylaminoimidazole synthetase rbh
S12_scaffold_631_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14671..15294
DNA (624bp) protein (208aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Phosphoribosylglycinamide formyltransferase n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KZF0_METC4
phosphoribosylglycinamide formyltransferase
S12_scaffold_631_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15222..16022)
DNA (801bp) protein (267aa)
Regulatory protein, putative n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=Q9A5Y5_CAUCR
Xanthine dehydrogenase YagS FAD-binding subunit {ECO:0000313|EMBL:KFC61626.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
regulatory protein
S12_scaffold_631_curated_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16210..16572)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031DF755
Uncharacterized protein {ECO:0000313|EMBL:KFC61624.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_631_curated_16
unknown

Not on your lists

comp(17074..17274)
DNA (201bp) protein (67aa)

This feature has no annotations

S12_scaffold_631_curated_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17651..18493
DNA (843bp) protein (281aa)
Outer membrane protein V n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CCX3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC61622.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
MltA-interacting MipA family protein
S12_scaffold_631_curated_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18605..19027)
DNA (423bp) protein (141aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
nucleoside diphosphate kinase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DDA558
ndk; nucleoside diphosphate kinase
S12_scaffold_631_curated_19
unknown

Not on your lists

19192..19326
DNA (135bp) protein (45aa)

This feature has no annotations

S12_scaffold_631_curated_20
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(19369..19638)
DNA (270bp) protein (90aa)
Sel1 repeat protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3C5I2_9RHIZ
Sel1 repeat protein {ECO:0000313|EMBL:KIF44276.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
hypothetical protein
S12_scaffold_631_curated_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19992..20378
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LB0_RHOP5
Uncharacterized protein {ECO:0000313|EMBL:KFC61620.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_631_curated_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20505..21212)
DNA (708bp) protein (236aa)
Glutathione S-transferase {ECO:0000313|EMBL:KFC61619.1}; EC=2.5.1.18 {ECO:0000313|EMBL:KFC61619.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Glutathione S-transferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWY3_9RHIZ rbh
glutathione S-transferase domain-containing protein rbh
S12_scaffold_631_curated_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21332..21820)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEB3_AZOBR
N-acetyltransferase {ECO:0000313|EMBL:KFC61618.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
conserved hypothetical protein; putative histone acetyltransfersase (HAT)
S12_scaffold_631_curated_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21850..22356)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PNS7_9RHIZ
Putative acetyltransferase {ECO:0000313|EMBL:KFC61617.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GCN5-like N-acetyltransferase
S12_scaffold_631_curated_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22361..23842)
DNA (1482bp) protein (494aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A9R4_STAND rbh
glutamyl-tRNA(Gln) amidotransferase subunit beta rbh
S12_scaffold_631_curated_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24223..25377
DNA (1155bp) protein (385aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QTY4_METSZ rbh
Secretion protein HlyD {ECO:0000313|EMBL:KFC61615.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Efflux transporter, RND family, MFP subunit rbh
S12_scaffold_631_curated_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25499..28690
DNA (3192bp) protein (1064aa)
transporter n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036E7E96 rbh
Hydrophobe/amphiphile efflux-1 HAE1 {ECO:0000313|EMBL:KFC61614.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter rbh
S12_scaffold_631_curated_28
unknown

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comp(28777..28983)
DNA (207bp) protein (69aa)

This feature has no annotations

S12_scaffold_631_curated_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29113..29454)
DNA (342bp) protein (114aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T146_9BRAD
Displaying 29 items

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