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S12_scaffold_722_curated

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_722_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1030
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F51484
Carotenoid 1,2-hydratase {ECO:0000313|EMBL:KFC63909.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_722_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1027..2208
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003172DDB rbh
Drug resistance transporter Bcr/CflA subfamily protein {ECO:0000313|EMBL:KFC63910.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
MFS permease
S12_scaffold_722_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2232..3098)
DNA (867bp) protein (289aa)
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:KFC63925.1}; EC=1.1.1.31 {ECO:0000313|EMBL:KFC63925.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NAD-binding 6-phosphogluconate dehydrogenase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WPZ3_9RHIZ rbh
NAD-binding 6-phosphogluconate dehydrogenase rbh
S12_scaffold_722_curated_4
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3232..3984
DNA (753bp) protein (251aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
methionine aminopeptidase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000310EC55 rbh
methionine aminopeptidase rbh
S12_scaffold_722_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3992..4708)
DNA (717bp) protein (239aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A655_STAND
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:KFC63924.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
polar amino acid ABC transporter inner membrane subunit
S12_scaffold_722_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4705..5415)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FA7551
ABC transporter permease {ECO:0000313|EMBL:KFC63923.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
polar amino acid ABC transporter inner membrane subunit
S12_scaffold_722_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5490..6263)
DNA (774bp) protein (258aa)
Extracellular solute-binding protein family 3 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A657_STAND
Amino acid ABC transporter substrate-binding protein, PAAT family {ECO:0000313|EMBL:KFC63922.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
family 3 extracellular solute-binding protein
S12_scaffold_722_curated_8
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6463..7665)
DNA (1203bp) protein (401aa)
Arabinose polymer transporter n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P5J6_AZOS1 rbh
MFS transporter {ECO:0000313|EMBL:KJR63949.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
araJ; arabinose polymer transporter rbh
S12_scaffold_722_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7806..8519
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003747D34 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC69652.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
S12_scaffold_722_curated_10
bacterium YEK0313, Bacteria

Not on your lists

comp(8535..9314)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0KM23_RHILT
Uncharacterized protein {ECO:0000313|EMBL:CEJ09816.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
S12_scaffold_722_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9311..10363)
DNA (1053bp) protein (351aa)
Putative agmatine ureohydrolase {ECO:0000313|EMBL:KFC63916.1}; EC=3.5.3.11 {ECO:0000313|EMBL:KFC63916.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
agmatinase n=1 Tax=Thalassospira lucentensis RepID=UPI0003B69299 rbh
agmatinase rbh
S12_scaffold_722_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10382..10894)
DNA (513bp) protein (171aa)
Acetyltransferase, GNAT family n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NYX6_9DELT
HAE1 family hydrophobic/amphiphilic exporter-1 (Mainly G-bacteria) {ECO:0000313|EMBL:KFC69619.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
acetyltransferase
S12_scaffold_722_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11083..12168
DNA (1086bp) protein (362aa)
Extracellular solute-binding protein, family 7 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A662_STAND rbh
Periplasmic mannitol-binding protein {ECO:0000313|EMBL:KFC63915.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
extracellular solute-binding protein rbh
S12_scaffold_722_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12413..13507
DNA (1095bp) protein (365aa)
ABC transporter substrate-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E88778 rbh
TRAP transporter solute receptor {ECO:0000313|EMBL:KFC63914.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
periplasmic mannitol-binding protein
S12_scaffold_722_curated_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13646..14029
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003681DA0
Uncharacterized protein {ECO:0000313|EMBL:KFC63913.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S12_scaffold_722_curated_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14039..14665)
DNA (627bp) protein (209aa)
Uracil-DNA glycosylase superfamily n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M7M2_METRJ rbh
Uracil DNA glycosylase superfamily protein {ECO:0000313|EMBL:KFC63927.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Uracil-DNA glycosylase superfamily protein
S12_scaffold_722_curated_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14662..15129)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC63928.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S12_scaffold_722_curated_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15129..15596)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC63929.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S12_scaffold_722_curated_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15596..16207)
DNA (612bp) protein (204aa)
Glutathione S-transferase-like protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11I24_MESSB
Glutathione S-transferase {ECO:0000313|EMBL:KFC63930.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glutathione S-transferase
S12_scaffold_722_curated_20
unknown

Not on your lists

comp(16304..16756)
DNA (453bp) protein (151aa)

This feature has no annotations

S12_scaffold_722_curated_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16856..17407)
DNA (552bp) protein (184aa)
exopolysaccharide biosynthesis protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000371DFD7
Succinoglycan biosynthesis protein {ECO:0000313|EMBL:KFC63931.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
exopolysaccharide biosynthesis protein
S12_scaffold_722_curated_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17495..19012
DNA (1518bp) protein (506aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Histidine kinase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IFX2_METNO rbh
histidine kinase rbh
S12_scaffold_722_curated_23
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19104..20222
DNA (1119bp) protein (373aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
ddlA; D-alanine--D-alanine ligase (EC:6.3.2.4) rbh
D-alanine--D-alanine ligase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I396_9BRAD rbh
S12_scaffold_722_curated_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20219..21238)
DNA (1020bp) protein (340aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YN98_9RHIZ rbh
S12_scaffold_722_curated_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21321..22199
DNA (879bp) protein (293aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Cobalamin synthase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UK87_METS4
cobalamin-5-phosphate synthase CobS
S12_scaffold_722_curated_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22196..22372
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1Z853_METPB
Uncharacterized protein {ECO:0000313|EMBL:KFC63936.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_722_curated_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22375..22857)
DNA (483bp) protein (161aa)
acetyltransferase n=1 Tax=Sinorhizobium medicae RepID=UPI00036C5819
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:KFC63937.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
N-acetyltransferase GCN5
S12_scaffold_722_curated_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22869..23708)
DNA (840bp) protein (280aa)
Putative permease n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL32_9RHIZ rbh
Putative permease {ECO:0000313|EMBL:KFC63938.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
S12_scaffold_722_curated_29
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23808..24530)
DNA (723bp) protein (241aa)
RNA signlal recognlition particle 4.5S RNA n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A69022
Uncharacterized protein {ECO:0000313|EMBL:AHE56762.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein rbh
S12_scaffold_722_curated_30
Pseudomonas sp. G5(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24624..25241)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. G5(2012) RepID=S2F6U7_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EPA99171.1}; TaxID=1268068 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G5(2012).;"
hypothetical protein
Displaying 30 items

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