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S12_scaffold_1313_curated

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_1313_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..408
DNA (408bp) protein (136aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CH49_9RHIZ
PpiC-type peptidyl-prolyl cis-trans isomerase
S12_scaffold_1313_curated_2
unknown

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comp(454..645)
DNA (192bp) protein (64aa)

This feature has no annotations

S12_scaffold_1313_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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788..2038
DNA (1251bp) protein (417aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1) rbh
N-acetylglutamate synthase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E0DBB6 rbh
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S12_scaffold_1313_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2019..2948
DNA (930bp) protein (310aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Microvirga sp. WSM3557 RepID=I4YM83_9RHIZ
DMT superfamily permease {ECO:0000313|EMBL:KFC74147.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Transmembrane drug/metabolite transporter family protein
S12_scaffold_1313_curated_5
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2945..3463
DNA (519bp) protein (173aa)
Putative lipoprotein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q9Z9_METSZ
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CCJ08372.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
S12_scaffold_1313_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3472..3876
DNA (405bp) protein (135aa)
Putative mutator protein mutT (Pyrophosphohydrolase) {ECO:0000313|EMBL:KFC74146.1}; EC=3.6.1.- {ECO:0000313|EMBL:KFC74146.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
mutator MutT NTP pyrophosphohydrolase (EC:3.6.1.-)
Putative mutator MutT protein putative NTP pyrophosphohydrolase n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7C6V1_METED
S12_scaffold_1313_curated_7
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3880..4590)
DNA (711bp) protein (237aa)
Mlr0330 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98N29_RHILO
Uncharacterized protein {ECO:0000313|EMBL:AID29926.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
S12_scaffold_1313_curated_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4690..5958)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YKH9_MOBAS rbh
Cytoplasmic protein {ECO:0000313|EMBL:KFL30353.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cytoplasmic protein
S12_scaffold_1313_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6057..6581)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00035EB3DB
Cysteine-rich secretory protein family {ECO:0000313|EMBL:KFC63585.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_1313_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6586..9264)
DNA (2679bp) protein (893aa)
Small-conductance mechanosensitive channel n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMC9_9RHIZ rbh
Potassium efflux system KefA protein {ECO:0000313|EMBL:KFC63584.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
mechanosensitive ion channel MscS rbh
S12_scaffold_1313_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9417..10511)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D09_RHOPB rbh
Glucokinase {ECO:0000313|EMBL:KFC63575.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
S12_scaffold_1313_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10681..11178
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNI2_9RHIZ
Cold shock protein (Beta-ribbon, CspA family) {ECO:0000313|EMBL:KFC63574.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_1313_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11284..12042)
DNA (759bp) protein (253aa)
Acetyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YM66_9RHIZ
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:KFC74157.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GCN5-related N-acetyltransferase
S12_scaffold_1313_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12044..12253)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WQG7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC74156.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
Displaying 14 items

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