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S12_scaffold_793_curated

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_793_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..492)
DNA (492bp) protein (164aa)
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:KFC73382.1}; EC=1.3.8.1 {ECO:0000313|EMBL:KFC73382.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Acyl-CoA dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ55_9RHIZ
acyl-CoA dehydrogenase domain-containing protein
S12_scaffold_793_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

681..1649
DNA (969bp) protein (323aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ54_9RHIZ rbh
Sua5/YciO/YrdC/YwlC family protein rbh
S12_scaffold_793_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1734..2633
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=1 Tax=Rhodovulum sp. PH10 RepID=J6JDW8_9RHOB
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC73384.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
LysR family transcriptional regulator
S12_scaffold_793_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2637..3623)
DNA (987bp) protein (329aa)
alcohol dehydrogenase n=2 Tax=Acetobacteraceae RepID=UPI000237EA09 rbh
Quinone oxidoreductase, YhdH/YhfP family {ECO:0000313|EMBL:KFC73386.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Quinone oxidoreductase, YhdH/YhfP family
S12_scaffold_793_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3721..4953)
DNA (1233bp) protein (411aa)
Arabinose efflux permease family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ50_9RHIZ rbh
Putative MFS permease {ECO:0000313|EMBL:KFC73387.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
major facilitator superfamily protein rbh
S12_scaffold_793_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5278..6489
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F0027F
Cell wall hydrolase, SleB {ECO:0000313|EMBL:KFC73388.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cell wall hydrolase SleB
S12_scaffold_793_curated_7
unknown

Not on your lists

comp(6567..6683)
DNA (117bp) protein (39aa)

This feature has no annotations

S12_scaffold_793_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7082..7675
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9VXS8_METEP
Uncharacterized protein {ECO:0000313|EMBL:KFC73390.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_793_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7907..8173)
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC73394.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S12_scaffold_793_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8448..8717)
DNA (270bp) protein (90aa)
Translation initiation factor IF-1 n=2 Tax=Xanthobacteraceae RepID=IF1_AZOC5
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
infA; translation initiation factor IF-1
S12_scaffold_793_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8796..10352)
DNA (1557bp) protein (519aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LY13_METRJ rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:KFC73396.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DEAD/DEAH box helicase rbh
S12_scaffold_793_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10495..10704)
DNA (210bp) protein (70aa)
Putative cold shock protein y4cH n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X4V2_RHIFR
Cold shock protein {ECO:0000313|EMBL:KFC73397.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cold shock protein y4cH
S12_scaffold_793_curated_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10976..11470
DNA (495bp) protein (165aa)
Glutathione-dependent formaldehyde-activating, GFA n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HS57_9RHIZ
Glutathione-dependent formaldehyde-activating, GFA {ECO:0000313|EMBL:EHK56482.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
glutathione-dependent formaldehyde-activating protein
S12_scaffold_793_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11507..11692)
DNA (186bp) protein (62aa)
UPI0003CF5FD4 related cluster n=1 Tax=unknown RepID=UPI0003CF5FD4
DUMP phosphatase {ECO:0000313|EMBL:KFC73398.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
haloacid dehalogenase
S12_scaffold_793_curated_15
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12222..12776)
DNA (555bp) protein (185aa)
Cytochrome c oxidase subunit II n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHN1_9RHIZ
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:EYR79357.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
coxB; cytochrome c oxidase subunit II
S12_scaffold_793_curated_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12780..15464)
DNA (2685bp) protein (895aa)
Pyruvate phosphate dikinase {ECO:0000313|EMBL:KFC73400.1}; EC=2.7.9.1 {ECO:0000313|EMBL:KFC73400.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ43_9RHIZ rbh
S12_scaffold_793_curated_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15652..16146)
DNA (495bp) protein (165aa)
Uncharacterized conserved protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HR19_AZOC5
UPF0260 protein FG93_01769 {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_793_curated_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16387..18597
DNA (2211bp) protein (737aa)
1A family penicillin-binding protein (EC:2.4.1.129) rbh
Penicillin-binding protein, 1A family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IF41_METNO rbh
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:KFC73402.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S12_scaffold_793_curated_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18673..19248
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LYR0_METRJ
Uncharacterized protein {ECO:0000313|EMBL:KFC73403.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
protein of unassigned function
S12_scaffold_793_curated_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19245..19877
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UEC9_METS4
Uncharacterized protein {ECO:0000313|EMBL:KFC73404.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_793_curated_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19879..20643)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI0003490A80
Uncharacterized protein {ECO:0000313|EMBL:KFC73405.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_793_curated_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20980..22155
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00036797E8
Uncharacterized protein {ECO:0000313|EMBL:KFC73407.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_793_curated_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22180..22515)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNH1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC73408.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
Displaying 23 items

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