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S12_scaffold_84_curated

Search features with annotation key words

Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_84_curated_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(162..854)
DNA (693bp) protein (231aa)
Invasion associated locus B n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZG9_9BRAD
Invasion associated locus B {ECO:0000313|EMBL:EAQ34619.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
invasion associated locus B
S12_scaffold_84_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1198..2619
DNA (1422bp) protein (474aa)
Putative Peptidase M20D, amidohydrolase Aminobenzoyl-glutamate utilization protein {ECO:0000313|EMBL:KFC70527.1}; EC=3.5.1.- {ECO:0000313|EMBL:KFC70527.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Hyppurate hydrolase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJF3_AGRRK rbh
hipO; hyppurate hydrolase rbh
S12_scaffold_84_curated_3
unknown

Not on your lists

comp(2747..3040)
DNA (294bp) protein (98aa)

This feature has no annotations

S12_scaffold_84_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3304..4413
DNA (1110bp) protein (370aa)
Putative aminotransferase {ECO:0000313|EMBL:KFC71611.1}; EC=2.6.1.- {ECO:0000313|EMBL:KFC71611.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
aminotransferase (EC:2.6.1.-)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVY5_9RHIZ rbh
S12_scaffold_84_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4435..5400)
DNA (966bp) protein (322aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:KFC71613.1}; EC=4.3.1.12 {ECO:0000313|EMBL:KFC71613.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Ornithine cyclodeaminase 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHE7_9RHIZ rbh
ornithine cyclodeaminase
S12_scaffold_84_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5393..6010)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVY3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC71614.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_84_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6021..7136)
DNA (1116bp) protein (372aa)
Putative aminotransferase {ECO:0000313|EMBL:KFC71615.1}; EC=2.6.1.- {ECO:0000313|EMBL:KFC71615.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVY4_9RHIZ rbh
aminotransferase rbh
S12_scaffold_84_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7289..8707
DNA (1419bp) protein (473aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYR8_RHOCS
S12_scaffold_84_curated_9
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8833..11841
DNA (3009bp) protein (1003aa)
Aminotransferase n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GLV7_RUEST rbh
Peptidase M23 {ECO:0000313|EMBL:EXL09350.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein rbh
S12_scaffold_84_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11883..12911)
DNA (1029bp) protein (343aa)
Beta-lactamase n=2 Tax=Ochrobactrum intermedium RepID=C4WR86_9RHIZ rbh
Putative Beta-lactamase {ECO:0000313|EMBL:KFC72245.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
beta-lactamase family protein
S12_scaffold_84_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12935..13729)
DNA (795bp) protein (265aa)
Oligopeptide transport protein (ABC superfamily, ATP-binding protein) {ECO:0000313|EMBL:KFC72244.1}; EC=3.6.3.27 {ECO:0000313|EMBL:KFC72244.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter related protein n=2 Tax=Ketogulonicigenium vulgare RepID=E3F5X5_KETVY rbh
dipeptide ABC transporter ATPase DppF rbh
S12_scaffold_84_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13726..14592)
DNA (867bp) protein (289aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI00039FE70A rbh
ABC transporter ATP-binding protein oligo/dipeptide transport protein {ECO:0000313|EMBL:KFC72243.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Dipeptide ABC transporter, ATP-binding protein
S12_scaffold_84_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14585..15511)
DNA (927bp) protein (309aa)
ABC transporter, permease protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJL8_9PROT rbh
Putative dipeptide ABC transporter {ECO:0000313|EMBL:KFC72242.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dppC; Dipeptide transport system permease protein DppC
S12_scaffold_84_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15521..16591)
DNA (1071bp) protein (357aa)
ABC transporter, permease protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJL7_9PROT rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:KFC72241.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dppB; Dipeptide transport system permease protein DppB
S12_scaffold_84_curated_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16602..18236)
DNA (1635bp) protein (545aa)
Tat pathway signal sequence domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJL6_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC72240.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Extracellular solute-binding protein family 5
S12_scaffold_84_curated_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18321..19748)
DNA (1428bp) protein (476aa)
Putative Peptidase M20D, amidohydrolase Aminobenzoyl-glutamate utilization protein {ECO:0000313|EMBL:KFC72239.1}; EC=3.5.1.- {ECO:0000313|EMBL:KFC72239.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Amidohydrolase n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JML0_9RHIZ rbh
amidohydrolase family protein
S12_scaffold_84_curated_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19778..21592)
DNA (1815bp) protein (605aa)
Prolyl endopeptidase n=2 Tax=Ochrobactrum intermedium RepID=C4WR80_9RHIZ rbh
Dipeptidyl anminopeptidase {ECO:0000313|EMBL:KFC72238.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_84_curated_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21603..22580)
DNA (978bp) protein (326aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
proline iminopeptidase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A4EA44 rbh
Prolyl aminopeptidase
S12_scaffold_84_curated_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22847..23407
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ARh5 RepID=UPI0003743DAC
Dual specificity protein phosphatase {ECO:0000313|EMBL:KFC71618.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_84_curated_20
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23420..23740)
DNA (321bp) protein (107aa)
Putative amicyanin protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KMI2_RHISN
putative amicyanin precursor protein
Putative amicyanin protein {ECO:0000313|EMBL:AHK46151.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
S12_scaffold_84_curated_21
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23751..24275)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4U3_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH89571.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
S12_scaffold_84_curated_22
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24370..25068)
DNA (699bp) protein (233aa)
UPI0003D004FF related cluster n=1 Tax=unknown RepID=UPI0003D004FF
RNA polymerase sigma-70 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
S12_scaffold_84_curated_23
bacterium YEK0313, Bacteria

Not on your lists

25281..26459
DNA (1179bp) protein (393aa)
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase (EC:3.5.1.4)
Amidase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IXZ4_9PROT rbh
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:CEJ14675.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
S12_scaffold_84_curated_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26456..26860
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KDG3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KFC69296.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
protein of unassigned function
S12_scaffold_84_curated_25
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26877..27179)
DNA (303bp) protein (101aa)
PhnA protein n=1 Tax=Aureimonas ureilytica RepID=UPI00035D16AA
PhnA protein
PhnA protein {ECO:0000313|EMBL:ACA20589.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
S12_scaffold_84_curated_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27266..27811)
DNA (546bp) protein (182aa)
Carboxymuconolactone decarboxylase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B8M7_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KFC72743.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
carboxymuconolactone decarboxylase
S12_scaffold_84_curated_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27829..28692)
DNA (864bp) protein (288aa)
Putative amidohydrolase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YRM0_9RHIZ rbh
N-carbamoyl-D-amino acid hydrolase {ECO:0000313|EMBL:KFC72742.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase rbh
S12_scaffold_84_curated_28
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28689..30356)
DNA (1668bp) protein (556aa)
ATPase component of various ABC-type transport systems with duplicated ATPase domain n=1 Tax=Microvirga sp. WSM3557 RepID=I4YRL9_9RHIZ rbh
ATPase component of various ABC-type transport systems with duplicated ATPase domain {ECO:0000313|EMBL:EIM26611.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
ABC transporter rbh
S12_scaffold_84_curated_29
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30356..31228)
DNA (873bp) protein (291aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YRL8_9RHIZ rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EIM26610.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
binding-protein-dependent transport systems inner membrane component rbh
S12_scaffold_84_curated_30
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31225..32169)
DNA (945bp) protein (315aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YRL7_9RHIZ rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EIM26609.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
binding-protein-dependent transport system inner membrane protein rbh
Displaying items 1-30 of 148 in total

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