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S12_scaffold_712_curated

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_712_curated_1
unknown

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comp(2..109)
DNA (108bp) protein (36aa)

This feature has no annotations

S12_scaffold_712_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(181..615)
DNA (435bp) protein (145aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HY24_PARL1
Nitronate monooxygenase {ECO:0000313|EMBL:KFC63941.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
activator of Hsp90 ATPase 1 family protein
S12_scaffold_712_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(639..983)
DNA (345bp) protein (115aa)
Regulatory protein ArsR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS10_PARL1
Transcriptional regulatory protein {ECO:0000313|EMBL:KFC63942.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
regulatory protein ArsR
S12_scaffold_712_curated_4
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1067..1948)
DNA (882bp) protein (294aa)
phenazine biosynthesis protein PhzF n=1 Tax=Bradyrhizobium japonicum RepID=UPI000368DDB1 rbh
Phenazine biosynthesis protein PhzF {ECO:0000313|EMBL:KGT78401.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
phenazine biosynthesis protein PhzF
S12_scaffold_712_curated_5
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2151..2969)
DNA (819bp) protein (273aa)
Transcriptional regulator, XRE family n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XNP0_PARAH rbh
transcriptional regulator, XRE family rbh
Transcriptional regulator, XRE family {ECO:0000313|EMBL:AGT08949.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
S12_scaffold_712_curated_6
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3113..4450
DNA (1338bp) protein (446aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
PREDICTED: histidine biosynthesis trifunctional protein-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1605F rbh
histidinol dehydrogenase rbh
S12_scaffold_712_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4467..5408
DNA (942bp) protein (314aa)
Putative glutathione ABC transporter, permease protein GsiC n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZXB4_9PROT
Putative ABC transporter permease protein {ECO:0000313|EMBL:KFC64164.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter permease
S12_scaffold_712_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5405..6298
DNA (894bp) protein (298aa)
peptide ABC transporter permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI000363A51B rbh
Putative ABC transporter permease protein oligopeptide/dipeptide ABC transporter {ECO:0000313|EMBL:KFC64163.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter permease rbh
S12_scaffold_712_curated_9

Not on your lists

6439..7935
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003625E02 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGA18434.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
conserved hypothetical protein; putative MlrC C-terminus domain
S12_scaffold_712_curated_10
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7925..8905
DNA (981bp) protein (327aa)
Putative branched-chain amino acid aminotransferase protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2A3N3_RHIET rbh
Putative branched-chain amino acid aminotransferase protein {ECO:0000313|EMBL:EGE60912.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
putative branched-chain amino acid aminotransferase rbh
S12_scaffold_712_curated_11
bacterium YEK0313, Bacteria

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8913..10496
DNA (1584bp) protein (528aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZYY5_9PROT rbh
Glutathione-binding protein GsiB {ECO:0000313|EMBL:CEJ15772.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
extracellular solute-binding protein
S12_scaffold_712_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10597..11622)
DNA (1026bp) protein (342aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
tRNA-dihydrouridine synthase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IRD0_METNO rbh
tRNA-dihydrouridine synthase A rbh
S12_scaffold_712_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11885..13717
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI00036BD83F rbh
Putative ABC transporter (Fused ATP-binding and permease components) {ECO:0000313|EMBL:KFC70887.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter rbh
S12_scaffold_712_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13752..14582)
DNA (831bp) protein (277aa)
ABC transporter permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8II07_AZOC5 rbh
Putative ABC transporter (Permease protein) {ECO:0000313|EMBL:KFC64024.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter permease rbh
S12_scaffold_712_curated_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14587..15477)
DNA (891bp) protein (297aa)
ABC transporter membrane spanning protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8II05_AZOC5 rbh
Putative ABC spermidine/putrescine transporter permease protein {ECO:0000313|EMBL:KFC64025.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter permease rbh
S12_scaffold_712_curated_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15474..16547)
DNA (1074bp) protein (358aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL47_9RHIZ rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFC64026.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter ATP-binding protein rbh
S12_scaffold_712_curated_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16631..17821)
DNA (1191bp) protein (397aa)
ABC transporter periplasmic substrate-binding protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IHZ9_AZOC5 rbh
ABC-type uncharacterized transport system, periplasmic component {ECO:0000313|EMBL:KFC64027.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter substrate-binding protein rbh
S12_scaffold_712_curated_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18000..18695
DNA (696bp) protein (232aa)
Putative transcriptional regulator, GntR Family n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AZX2_AZOBR
Putative transcriptional regulator, GntR Family {ECO:0000313|EMBL:KFC64028.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transcriptional regulator
S12_scaffold_712_curated_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18742..19938
DNA (1197bp) protein (399aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
mannonate dehydratase (EC:4.2.1.8) rbh
Mannonate dehydratase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL43_9RHIZ rbh
S12_scaffold_712_curated_20
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19997..20692)
DNA (696bp) protein (232aa)
urease accessory protein UreE n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034C516B
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00091870}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
UreE urease accessory domain-containing protein
S12_scaffold_712_curated_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20803..21831)
DNA (1029bp) protein (343aa)
ABC-type Fe3+ transport system, periplasmic component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV07_9RHIZ rbh
Putative iron uptake ABC transporter periplasmic solute-binding protein {ECO:0000313|EMBL:KFC64047.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
extracellular solute-binding protein
S12_scaffold_712_curated_22
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21905..22792)
DNA (888bp) protein (296aa)
membrane protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034D30D5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS40971.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
S12_scaffold_712_curated_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22975..23322)
DNA (348bp) protein (116aa)
GTP-binding family protein n=2 Tax=Toxoplasma gondii RepID=B6KP56_TOXGO
Uncharacterized protein {ECO:0000313|EMBL:KFC64050.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S12_scaffold_712_curated_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23436..24332)
DNA (897bp) protein (299aa)
Carbohydrate kinase, PfkB family protein {ECO:0000313|EMBL:KFC64052.1}; EC=2.7.1.- {ECO:0000313|EMBL:KFC64052.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
yihV; sugar kinase YihV (EC:2.7.1.3)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E83C7B rbh
S12_scaffold_712_curated_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24337..24786)
DNA (450bp) protein (150aa)
Lactoylglutathione lyase {ECO:0000313|EMBL:KFC64054.1}; EC=4.4.1.5 {ECO:0000313|EMBL:KFC64054.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glyoxalase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F70CBA
glyoxalase/bleomycin resistance protein/dioxygenase
S12_scaffold_712_curated_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24891..25583
DNA (693bp) protein (231aa)
Cation diffusion facilitator family transporter n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B2N0_9BACT
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:KFC64055.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cation transporter
Displaying 26 items

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